Table 3 Common molecular taxonomy sequence annotations in RoBuST
From: RoBuST: an integrated genomics resource for the root and bulb crop families Apiaceae and Alliaceae
Marker Class | Number of Apiaceae species with this sequence | Total number of sequences for Apiaceae | Number of Alliaceae species with this sequences | Total number of sequences for Alliaceae |
|---|---|---|---|---|
External Transcribed Spacer (ETS) | 2 | 2 | 45 | 47 |
Internal Transcribed Spacer (ITS) | 1475 | 4844 | 319 | 1203 |
Non Transcribed Spacer (NTS) | 419 | 791 | 86 | 146 |
matK | 7 | 7 | - | - |
rp116-rp114 spacers | 3 | 3 | - | - |
nad7 | - | - | 2 | 2 |
18S rRNA | 137 | 224 | 51 | 61 |
5.8S rRNA | 926 | 1689 | 318 | 601 |
26S rRNA | 136 | 216 | 1 | 1 |