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Table 2 Relative synonymous substitutions of PMM genes from rice, B. distachyon, bread wheat, and barley a

From: Molecular analysis of phosphomannomutase (PMM) genes reveals a unique PMM duplication event in diverse Triticeae species and the main PMM isozymes in bread wheat tissues

PMMgenes compared

Number of substitutions per synonymous site (dS)

Averaged dS

OsPMM/BdPMM

0.4231 ± 0.0646

 

OsPMM/HvPMM-1

0.4807 ± 0.0723

 

OsPMM/TaPMM-A1

0.4324 ± 0.0656

0.4385 ± 0.0669 (OsPMM/TaPMM1 genes)

OsPMM/TaPMM-B1

0.4573 ± 0.0701

 

OsPMM/TaPMM-D1

0.4259 ± 0.0651

 

OsPMM/TaPMM-B2

0.5150 ± 0.0791

0.4997 ± 0.0763 (OsPMM/TaPMM2 genes)

OsPMM/TaPMM-D2

0.4844 ± 0.0735

 

BdPMM/HvPMM-1

0.3449 ± 0.0542

 

BdPMM/TaPMM-A1

0.2884 ± 0.0471

0.2974 ± 0.0486 (BdPMM/TaPMM1 genes)

BdPMM/TaPMM-B1

0.3121 ± 0.0508

 

BdPMM/TaPMM-D1

0.2918 ± 0.0479

 

BdPMM/TaPMM-B2

0.3647 ± 0.0583

0.3503 ± 0.0562 (BdPMM/TaPMM2 genes)

BdPMM/TaPMM-D2

0.3358 ± 0.0541

 

HvPMM-1/TaPMM-A1

0.0921 ± 0.0229

0.0971 ± 0.0237 (HvPMM-1/TaPMM1 genes)

HvPMM-1/TaPMM-B1

0.1126 ± 0.0261

 

HvPMM-1/TaPMM-D1

0.0867 ± 0.0222

 

HvPMM-1/TaPMM-B2

0.1857 ± 0.0355

0.1826 ± 0.0351 (HvPMM-1/TaPMM2 genes)

HvPMM-1/TaPMM-D2

0.1795 ± 0.0346

 

TaPMM-B1/TaPMM-B2

0.1567 ± 0.0323

0.1398 ± 0.0299 (TaPMM1/TaPMM2 genes)

  1. a The dS values and their standard deviations were calculated using PMM cDNA coding sequences. TaPMM-A2 was not included in the calculation owing to the occurrence of mutation in its coding region.