Table 7 Primer pairs used in the Principal Coordinates Analysis to compare the genetic diversity and affinities of Hs compared with a representative sample of commercial and wild diploid palms (listed in Table 6).
From: Production of haploids and doubled haploids in oil palm
No | Primer | Forward (5'-3') | Reverse (5'-3') |
|---|---|---|---|
1 | 1996 | CACTGGGGTCATCTTCATCT | TCGTTCTCTTTCCTTTTGTC |
2 | 2215 | GAACTTGGCGTGTAACT | TGGTAGGTCTATTTGAGAGT |
3 | 2427 | GAAGGGGCATTGGATTT | CAGGTGACCAAGTGTAAT |
4 | 2569 | TAGCCGCACTCCCACGAAGC | CCAGAATCATCAGACTCGGACAG |
5 | 2595 | TCAAAGAGCCGCACAACAAG | ACTTTGCTGCTTGGTGACTTA |
6 | 2600 | GGGGATGAGTTTGTTTGTTC | GGCAACATGAAGGTAAG |
7 | 3282 | GTAACAGCATCCACACTAAC | GCAGGACAGGAGTAATGAGT |
8 | 3298 | GACTACCGTATTGCGTTCAG | TTTATCAGGAGTTTTTGTTTGAGAG |
9 | 3311 | AATCCAAGTGGCCTACAG | TCCCTACAATAGCCATCTC |
10 | 3321 | CAAGGAGGAGCAGGTGAG | TACGGCCTCGGTTCTACAC |
11 | 3399 | AGCCAATGAAGGATAAAGG | CCACTTAGAGGTAAAACAACAG |
12 | 3400 | CAATTCCAGCGTFAFTATAG | AGTGGCAGTGGAAAAACAGT |
13 | 3433 | GGTTCAATGGCATACAT | ACTCCCCTCTTTGACAT |
14 | 3538 | TCAAGCCACATCCTAACTAC | CTCATAGCCTTTGTTGTGT |
15 | 3544 | AGCAGGGCAAGAGCAATACT | TTCAGCAGCAGGAAACATC |
16 | 3546 | GCCTATCCCCTGAACTATCT | TGCACATACCAGCAACAGAG |
17 | 3574 | AGAGACCCTATTTGCTTGAT | GACAAAGAGCTTGTCACAC |
18 | 3711 | GTCTCATGTGGCTACCTCTC | GCTAGGTGAAAAATAAAGTT |
19 | 3819 | CCTCCTTTGGAATTATG | GTGTTTGATGGGACATACA |
20 | 219 | TTTGCTCGGCGGATACAT | GGAGGGCAGGAACAAAAAGT |
21 | 257 | GCAGCTAGTCACCTGAAC | GACGAGACTGGAAAGATG |
22 | 782 | CGTTCATCCCACCACCTTTC | GCTGCGAGGCCACTGATAC |
23 | 783 | GAATGTGGCTGTAAATGCTGAGTG | AAGCCGCATGGACAACTCTAGTAA |
24 | 882 | TTGATCTTAGACATAACATACTGTA | AAAGCGCGTAATCTCATAGT |
25 | 894 | TGCTTCTTGTCCTTGATACA | CCACGTCTACGAAATGATAA |
26 | 3213 | GCTCTTTGTATTTCCTGGTTC | AGCAGCAAACCCTACTAACT |
27 | 3691 | GCATCATTGGACTATCATACC | TTGTGAACCAGGGAACTATC |
28 | vs1 | GAGATTACAAAGTCCAAACC | TCAAAATTAAGAAAGTATGC |