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Table 2 GOSLIM categorization in biological processes of genes expressed at elevated levels in AtGRP7-ox plants.

From: Global transcript profiling of transgenic plants constitutively overexpressing the RNA-binding protein AtGRP7

 

n genes

selection

expected

frequencies

log

enrichments

p values

enriched

p values

depleted

other physiological processes

21

21.3

-0.018

1

1

response to stress

9

4.9

0.854

0.425

1

response to abiotic or biotic stimulus

12

6.7

0.845

0.252

1

signal transduction

7

5.9

0.251

1

1

other cellular processes

8

7.0

0.189

1

1

other biological processes

13

13.1

-0.013

1

1

biological process unknown

59

65.4

-0.149

1

1

other metabolic processes

56

50.4

0.151

1

1

developmental processes

4

4.8

-0.276

1

1

cell organization and biogenesis

3

3.8

-0.349

1

1

transcription

11

11.6

-0.071

1

1

protein metabolism

23

22.7

0.021

1

1

DNA or RNA metabolism

5

4.1

0.287

1

1

transport

15

11.8

0.349

1

1

electron transport or energy pathways

8

7.9

0.018

1

1