Table 1 Nucleotide diversity of VvDXS in grapevine
From: A candidate gene association study on muscat flavor in grapevine (Vitis viniferaL.)
Parameters | Overall | Coding/non coding |
|---|---|---|
Varieties | 148 | Â |
Genomic ATG-TAG (protein coding region) | 4790 bp | Â |
Full-ORF cDNA | 2151 bp | Â |
Predicted protein | 716 aa | Â |
Exons | 10 | Â |
Introns | 9 | Â |
Number of polymorphic sites | 101 | Â |
SNPs | 95 | 25/70 |
INDELS | 7 | 0/7 |
Frequency of SNPs | 1 per 51 bp | 1 per 86/1 per 38 |
Frequency of INDELS | 1 per 670 bp | -/1 per 372 bp |
Synonymous changes | 15 | Â |
Non-synonymous changes | 10 | Â |
Synonymous vs non-synonymous mutations | 1.5:1 | Â |