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Table 2 P-values by the paired t-test for the heterogeneity of evolutionary rates

From: Genome-wide investigation reveals high evolutionary rates in annual model plants

Nuclear Housekeeping Genes (85 Loci)

Comparison Pair

d

dN

dS

 

Vv

Pt

Vv

Pt

Vv

Pt

At

5.09E-05

6.72E-04

1.66E-06

0.011

3.29E-06

1.37E-04

Mt

1.16E-06

7.74E-04

3.60E-08

3.07E-03

2.26E-05

1.59E-03

Non-Housekeeping Gene Families (111 Clades)

Comparison Pair

d

d N

d S

 

Vv

Pt

Vv

Pt

Vv

Pt

At

6.12E-07

6.24E-05

1.22E-03

0.045

6.58E-06

6.66E-05

Mt

5.32E-09

7.45E-06

1.07E-07

1.55E-05

2.79E-07

1.12E-03

Chloroplast Genes (34 Loci)

Comparison Pair

d

d N

d S

 

Vv

Pt

Vv

Pt

Vv

Pt

At

8.49E-08

8.09E-08

5.77E-03

0.243

1.48E-07

4.79E-04

Mt

1.22E-12

3.98E-10

2.00E-04

4.66E-03

2.96E-12

2.12E-09

  1. The P-values of paired t-test in all 4 annual-perennial cross-comparisons suggest higher evolutionary rates in annuals than in perennials. The estimation of evolutionary rate is based on the ML method.