Table 1 The 15 most highly upregulated Affymetrix® probesets found in HiPro from stage one to stage four
Affy ID | Pvalue | HiPro Stage 1 | HiPro Stage 4 | Ratio of Means Stage 4/Stage 1 | Uniprot Description | E-value |
|---|---|---|---|---|---|---|
Gma.1017.1.S1_at | 1.57E-09 | 750 | 815093 | 1086.8 | Cluster: Beta-conglycinin, beta chain precursor; Glycine max | 0 |
Gma.1017.1.S1_s_at | 4.06E-06 | 2032 | 952032 | 468.5 | " | 0 |
Gma.1017.2.S1_a_at | 7.97E-06 | 5017 | 1160437 | 231.3 | " | 0 |
Gma.8531.1.S1_at | 2.67E-05 | 3496 | 711843 | 203.6 | Cluster: Seed maturation protein PM31; Glycine max | 4 × 10-87 |
Gma.11119.2.S1_s_at | 9.84E-05 | 1209 | 139593 | 115.4 | Cluster: G. max mRNA from stress-induced gene; Glycine max | 2 × 10-79 |
GmaAffx.48565.1.S1_at | 8.72E-05 | 4270 | 421867 | 98.8 | Cluster: Oxidoreductase, short chain dehydrogenase/reductase family, putative; Medicago truncatula | 6 × 10-56 |
AFFX-Gm_SucBP_5_at | 3.42E-07 | 3406 | 332671 | 97.7 | Cluster: Sucrose-binding protein 2; Glycine max | 0 |
Gma.10058.1.S1_at | 5.23E-05 | 6724 | 510079 | 75.9 | Cluster: Glycinin G3 precursor [Contains: Glycinin A subunit; Glycinin B subunit]; Glycine max | 0 |
Gma.939.1.A1_at | 1.31E-04 | 13550 | 833645 | 61.5 | Cluster: Oxidoreductase, short chain dehydrogenase/reductase family, putative; Medicago truncatula | 1 × 10-65 |
Gma.2505.1.S1_a_at | 3.11E-05 | 2463 | 112324 | 45.6 | Cluster: Ferritin-2, Chloroplast precursor; Glycine max | 1 × 10-142 |
Gma.10.1.S1_at | 5.93E-04 | 3516 | 141501 | 40.2 | Cluster: Late embryogenesis-abundant protein; Glycine max | 7 × 10-54 |
Gma.2505.1.S1_at | 7.47E-05 | 5640 | 215422 | 38.2 | Cluster: Ferritin-2, chloroplast precursor; Glycine max | 1 × 10-142 |
GmaAffx.8078.1.S1_at | 1.38E-04 | 7347 | 277493 | 37.8 | Cluster: Expressed protein; Oryza sativa (japonica cultivar-group) | 1 × 10-19 |
GmaAffx.24413.1.A1_at | 1.01E-04 | 3559 | 117894 | 33.1 | Rep: Pv42p - Phaseolus vulgaris (Kidney bean) (French bean) | 1 × 10-14 |
Gma.8445.1.S1_at | 5.03E-04 | 1066 | 34010 | 31.9 | Cluster: Basic 7S globulin 2 precursor (Bg) (SBg7S) Glycine max | 0 |