DNA polymorphisms and haplotype patterns of transcription factors involved in barley endosperm development are associated with key agronomic traits

Table 1 Estimates of nucleotide and haplotype diversity for the candidate genes BLZ1, BLZ2, BPBF and HvGAMYB

Accession (sub)set¹	No. of polymorphism	Nucleotide diversity (π × 10^-3)	No. of haplotypes	Haplotype diversity (Hd)
	BLZ1
Total	20	5.6	8	0.65
AM	20	5.8	6	0.68
EA	19	6.0	7	0.77
EU	20	5.2	8	0.66
WANA	20	5.2	8	0.73
2-rowed	19	5.4	7	0.63
6-rowed	20	5.8	8	0.70
	BLZ2
Total	72	6.5	18	0.68
AM	27	6.0	4	0.65
EA	64	8.0	9	0.87
EU	67	4.0	9	0.38
WANA	56	6.3	9	0.80
2-rowed	58	1.8	9	0.23
6-rowed	68	5.9	16	0.86
	BPBF
Total	26	8.1	21	0.68
AM	22	9.1	4	0.60
EA	25	7.6	11	0.73
EU	23	7.7	14	0.62
WANA	21	8.9	8	0.77
2-rowed	23	7.4	14	0.56
6-rowed	25	8.7	14	0.77
	HvGAMYB
Total	45	2.4	18	0.74
AM	34	2.8	8	0.80
EA	30	1.8	8	0.64
EU	31	2.1	9	0.68
WANA	37	2.7	11	0.84
2-rowed	29	1.9	10	0.61
6-rowed	43	2.7	15	0.84

1: Diversity estimates for different geographic regions (AM: America, EA: East Asia, EU: Europe, WANA: West Asia and North Africa) and in two-rowed and six-rowed barleys are given

ISSN: 1471-2229