Table 3 Summary of the S. hermonthica EST sequence analysis
Group | Records |
|---|---|
Number of independent clones | 37,710 |
Number of raw sequences | 75,330 |
Number of high quality sequences | 67,814 |
Number of unigenes | 17,137 |
   singletons | 6,818 |
   contigs | 10,319 |
Average unigene length | 775.3 bp |
Minimum unigene length | 101 bp |
Maximum unigene length | 3,051 bp |
Average number of ESTs per unigene | 2.9 |
Maximum number of ESTs per contig | 106 |
Number of superunigenes | 12,272 |
   with more than one unigene | 2,203 |
   with one unigene | 10,069 |
Number of putative SNPs (pSNPs) | 9,299 |
Number of putative SSRs (pSSRs) | 1,445 |