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Table 5 Genes called up in 4xX2x and 6xX2x, not up in 2xX4x and 2xX6x.

From: Transcriptional profiles underlying parent-of-origin effects in seeds of Arabidopsis thaliana

AtId

symbol

annotation

GO biological process (function)

At1g13080

CYP71B2

cytochrome P450 monooxygenase

heat acclimatino

At1g15100

RHA2A

RING-H2 finger protein

(protein binding)

   

response to auxin stimulus

At1g19850

ARF5/MP/IAA24

auxin response factor

(transcription factor activity)

At1g23205

 

invertase/pectin methylesterase inhibitor family protein

(pectinesterase inhibitor activity)

  

DREB subfamily A-5 of ERF/AP2 transcription factor

 

At1g46768

RAP2.1

family

regulation of transcription

At1g47960

C/VIF1

cell wall/vacuolar invertase

(pectinesterase inhibitor activity)

At1g56280

ATDI19

drought-responsive family protein

response to water deprivation

At1g70670

 

caleosin-related family protein

(calcium ion binding)

At1g80170

 

polygalacturonase/pectinase

carbohydrate metabolic process

At2g03980

 

GDSL-motif lipase/hydrolase family protein

lipid metabolic process

   

auxin polar transport/carotenoid

At2g26170

CYP711A1/MAX1

thromboxane-A synthase

biosynthetic process

At2g37130

PER21

peroxidase

defense response to fungus

At2g37710

RLK

receptor lectin kinase

response to salicylic acid stimulus

At2g39400

 

hydrolase

aromatic compound metabolic process

At3g11340

 

UDP-glucoronosyl/UDP-glucosyl transferase family protein

metabolic process

At3g14280

 

unknown protein

unknown

At3g17790

ATACP5/PAP17

acid phosphatase

cellular phosphate ion homeostasis

At3g62650

 

binding

transport

At4g10955

 

lipase class 3 family protein

lipid metabolic process

At4g10960

UGE5

UDP-D-glucose 4-epimerase activity

response to stress

At4g11410

 

short-chain dehydrogenase/reductase (SDR) family protein

metabolic process

At4g15420

 

PRLI-interacting factor K

ubiquitin-dependent protein catabolism

At4g18550

 

lipase class 3 family protein

lipid metabolic process

At4g21590

ENDO3

putative endonuclease

DNA catabolism/stamen development

At4g32180

ATPANK2

pantothenate kinase

coenzyme A biosynthesic process

At5g03200

 

zinc finger (C3HC4-type RING finger) family protein

N-terminal protein myristoylation

At5g20580

 

unknown protein

unknown

At5g23660

MTN3

homolog of the Medicago nodulin MTN3

unknown

At5g43810

ZLL/PNH

translation initiation factor

(translation initiation factor activity)

At5g44380

 

FAD-binding domain-containing protein

response to oxidative stress

At5g46780

 

VQ motif-containing protein

Unknown

  1. Up = (SLR/pSLR ≥ 0.6), not up = (SLR/pSLR (≤ 0.3).
  2. GO function terms are provided where no biological process terms were annotated.
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BMC Plant Biology

ISSN: 1471-2229

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