From: The Dunaliella salina organelle genomes: large sequences, inflated with intronic and intergenic DNA
Genus and species | Clade | Mapping conformation | Size (kb) | % codinga | %GC | GenBank Accession | Reference |
---|---|---|---|---|---|---|---|
MITOCHONDRIAL GENOMES | |||||||
Chlamydomonas incerta | Reinhardtinia | linear | ~17.5c | ~75c | ~44c | DQ373068 | [35] |
Chlamydomonas reinhardtii | Reinhardtinia | linear | 15.8-18.9b | 67-82 | ~45 | EU306617-EU306623 | |
Polytomella capuana | Reinhardtinia | linear | 13.0 | 82.0 | 57.2 | EF645804 | [36] |
Polytomella parva | Reinhardtinia | linear-fragmented | 16.2d | 65.5d | 41.0d | AY062933-AY062934 | [33] |
Polytomella piriformis g | Reinhardtinia | linear-fragmented | 16.1d | 65.8d | 42.0d | GU108480-GU108481 | NA |
Volvox carteri f. nagariensis | Reinhardtinia | circularf | ~35c | <40c | ~34c | EU760701, GU084821 | |
Chlamydomonas eugametos | Moewusinia | circular | 22.9 | 53.4 | 34.6 | AF008237 | [31] |
Chlamydomonas moewusii | Moewusinia | circulare | ~21e | -- | -- | -- | [39] |
Chlamydomonas pitschmannii | Moewusinia | circulare | ~16.5e | -- | -- | -- | [40] |
Chlorogonium elongatum | Chlorogonia | circular | 22.7 | 53.3 | 37.8 | Y13643-Y13644, Y07814 | [32] |
Dunaliella salina | Dunaliellinia | circular | 28.3 | 42.0 | 34.4 | GQ250045 | this study |
PLASTID GENOMES | |||||||
Chlamydomonas gelatinosa | Reinhardtinia | circulare | ~285e | -- | -- | -- | [41] |
Chlamydomonas reinhardtii | Reinhardtinia | circular | 204.2 | 43.3 | 34.5 | FJ423446 | [34] |
Volvox carteri f. nagariensis | Reinhardtinia | circular | ~525c | <20c | ~43c | GU084820 | |
Chlamydomonas eugametos | Moewusinia | circulare | ~243e | -- | -- | -- | [39] |
Chlamydomonas moewusii | Moewusinia | circulare | ~292e | -- | -- | -- | [39] |
Chlamydomonas pitschmannii | Moewusinia | circulare | ~187e | -- | -- | -- | [40] |
Dunaliella salina | Dunaliellinia | circular | 269.0 | 34.5 | 32.1 | GQ250046 | this study |