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Table 3 BLAST results for plant genes. Genes hypothesized to be important in the colonization and adaptation of land plants (Graham et al. 2000).

From: Uncovering the evolutionary origin of plant molecular processes: comparison of Coleochaete (Coleochaetales) and Spirogyra (Zygnematales) transcriptomes

 

Gene name

Tair Num.

P. patens

C. reinhartii

C. orbicularis

S. pratensis

   

Hits

e-value

Hits

e-value

Hits

e-value

Hits

e-value

Cellulosic cell wall

RSW1

AT4G32410

19

0.0

-

-

2

e-130

5

0.0

Cytokinetic phragmoplast

GEM1/MOR1

AT2G35630

2

0.0

1

0.0

2

e-51

1

2e-70

Plasmodesmata

CRT1

AT1G56340

6

e-62

1

e-125

5

e-141

3

3e-53

asymmetric cell division

WUSCHEL

AT1G20700

2

e-32

-

-

2

e-33

0

 

asymmetric cell division

GNOM

AT1G13980

7

0.0

3

e-108

1

7e-49

0

 

Specialized cells

Alpha Expansions

AT1G12560

39

e-70

-

-

0

 

12

3e-53

Specialized cells

Beta Expansoins

AT1G65680

4

7e-44

-

-

0

 

2

1e-24

Multicellular sporophyte body

MERISTEM LAYER1

AT4G21750

-

-

-

-

1

e-106

1

6e-53

Ploidy level influence in tissue differentiation

MADS domain

AT1G22130

10

e-22

-

-

0

 

0

 
  1. CDSs of noted genes were BLASTed against protein databases of two reference genomes, Physcomitrella patens and Chlamydomonas reinhartii, and our two charophytes, Coleochaete orbicularis and Spirogyra pratensis. Only BLASTx hits below e-20 are reported.
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BMC Plant Biology

ISSN: 1471-2229

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