Class | Order | Family | Code | Elements | Complete TSD | Nested | Length (bp) | % TEs | % Contig |
---|---|---|---|---|---|---|---|---|---|
Class I (Retrotransposable elements) | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 | LINE | Unknown | RIX | 1 |  | 1 | 2962 | 0.46% | 0.38% |
 | LTR | Copia | RLC | 9 | 9 | 1 | 93966 | 14.66% | 11.99% |
 |  | Gypsy | RLG | 55 | 39 | 19 | 401485 | 62.64% | 51.24% |
 |  | Unknown | RLX | 6 | 3 | 2 | 29915 | 4.67% | 3.82% |
Total | Â | Â | Â | 71 | 51 | 23 | 528328 | 82.42% | 67.43% |
Class II (DNA Transposons) | TIR | CACTA | DTC | 9 | 5 | 5 | 100864 | 15.74% | 12.87% |
 |  | Harbinger | DTH | 1 |  |  | 1838 | 0.29% | 0.23% |
 |  | Mutator | DTM | 1 |  |  | 802 | 0.13% | 0.10% |
 |  | Tc1- mariner | DTT | 1 |  |  | 693 | 0.11% | 0.09% |
 | Unknown |  | DXX | 1 |  |  | 730 | 0.11% | 0.09% |
Total | Â | Â | Â | 13 | 5 | 5 | 104927 | 16.37% | 13.39% |
Unknown | Â | Â | XXX | 2 | Â | Â | 7733 | 1.21% | 0.99% |
Total Transposable elements | Â | Â | Â | 86 | 56 | 28 | 640988 | Â | 81.81% |