Skip to main content

Table 2 Description of the Sce_Assembly03.

From: From RNA-seq to large-scale genotyping - genomics resources for rye (Secale cereale L.)

  Multi-line contigs Single-line contigs
Number of reads 2,000,855 286,386
Number of reads/contig 60 3
L30 [bp] 1,527 505
L50 [bp] 1,070 333
L70 [bp] 727 247
Number of contigs 33,352 82,048
   < 500 bp 11,188 71,581
   501-1000 bp 12,679 8,347
   1001-2000 bp 7,693 1,952
   2001-5000 bp 1,767 166
   > 5000 bp 25 2
Longest sequence [bp] 8,636 5,721