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Table 4 Details of 20 highly polymorphic pigeonpea genic-SSR markers, including a range of allele sizes, number of alleles and PIC values among 30 genotypes

From: Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]

Sr. No.

Marker Id.

Allele size (bp)

Number of alleles

PIC Value

   

Cultivars

Wild

Total

Cultivars

Wild

Total

1.

ASSR1

75-120

3

4

7

0.46

0.67

0.65

2.

ASSR3

125-150

3

3

4

0.43

0.85

0.69

3.

ASSR8

130-150

5

4

5

0.68

0.72

0.69

4.

ASSR23

130-170

4

4

5

0.40

0.55

0.62

5.

ASSR66

170-210

2

6

8

0.35

0.82

0.68

6.

ASSR70

150-190

4

3

7

0.23

0.78

0.48

7.

ASSR93

140-170

4

4

6

0.48

0.50

0.56

8.

ASSR97

90-150

3

7

10

0.29

0.86

0.56

9.

ASSR148

90-120

5

3

5

0.59

0.82

0.71

10.

ASSR206

115-155

2

2

6

0.63

0.77

0.69

11.

ASSR228

130-150

5

2

5

0.68

0.83

0.71

12.

ASSR277

90-145

2

7

8

0.30

0.61

0.53

13.

ASSR281

210-245

5

3

5

0.69

0.67

0.72

14.

ASSR304

90-120

6

6

9

0.35

0.82

0.64

15.

ASSR317

13-170

5

5

8

0.65

0.85

0.72

16.

ASSR352

110-145

3

3

5

0.77

0.69

0.65

17.

ASSR363

170-195

4

5

5

0.48

0.78

0.66

18.

ASSR366

135-150

3

5

6

0.33

0.63

0.52

19.

ASSR379

120-140

4

2

5

0.73

0.47

0.72

20.

ASSR390

160-195

3

4

6

0.41

0.72

0.46

 

Average

 

3.75

4.1

6.25

0.4965

0.7205

0.633