Table 3 Overlapping transcriptome responses of UniTags that are highly up-regulated in roots and nodules upon salt stress
From: The salt-responsive transcriptome of chickpea roots and nodules via deepSuperSAGE
Tag ID | Protein | Fold induction (roots) | Fold induction (nodules) | Associated process | Uniprot ID |
|---|---|---|---|---|---|
STCa-18884 | Early nodulin | 60,95 | 61,44 | Nodulation | NO40_SESRO |
STCa-22299 | Predicted protein | 20,70 | 13,65 | Unknown | A9TXV0_PHYPA |
STCa-17434 | Chitinase-related agglutinin | 18,67 | 13,65 | Defense | A1YZD2_ROBPS |
STCa-24417 | Lipoxygenase | 24,34 | 12,79 | Lypid metabolism | B7Z177_PEA |
STCa-5357 | Phosphatidylinositol transfer-like protein III | 8,12 | 11,94 | Unknown | Q94FN1_LOTJA |
STCa-175 | Transcription elongation factor 1 | 13,79 | 10,24 | Transcription | ELOF1_ARATH |
STCa-7855 | Abnormal suspensor SUS2 | 9,74 | 10,24 | Unknown | UPI000016331D |
STCa-705 | MAP kinase protein | 8,12 | 10,24 | Signal transduction | Q9SMJ7_CICAR |
STCa-5894 | General substrate transporter | 34,09 | 8,53 | Transport | A2Q5Z1_MEDTR |
STCa-5877 | Alternative oxidase | 30,85 | 8,53 | Redox homeostasis | Q84KA1_CROSA |
STCa-1885 | Mob1-like protein | 19,47 | 8,53 | Cytokinesis | Q2WBN3_MEDFA |
STCa-170 | Mob1-like protein | 12,17 | 8,53 | Cytokinesis | Q2WBN3_MEDFA |
STCa-16125 | Cytochrome c oxidase subunit 6b | 11,36 | 8,53 | Redox homeostasis | Q8LD51_ARATH |
STCa-8434 | Fiber protein Fb2 | 10,55 | 8,53 | Unknown | Q8GT87_GOSBA |
STCa-18178 | Probable histone H2A.2 | 9,74 | 8,53 | DNA stability | H2A2_MEDTR |
STCa-15648 | GR395157.1 C.arietinum EST | 22,30 | 23,87 | Uncharacterized | - |
STCa-19240 | GR916593.1 C.arietinum EST | 10,54 | 10,23 | Uncharacterized | - |
STCa-11740 | GR408054.1 C.arietinum EST | 10,54 | 11,94 | Uncharacterized | - |
STCa-15130 | Contig45449 C.arietinum EST | 8,11 | 8,53 | Uncharacterized | - |
STCa-7445 | Contig739 C.arietinum EST | 17,84 | 10,23 | Uncharacterized | - |
STCa-1958 | No homologous EST | 14,61 | 13,65 | Un-annotated | - |
STCa-8135 | No homologous EST | 8,11 | 8.53 | Un-annotated | - |