Table 2 Small RNA sequences cloned from L. albus phloem exudate and matches of these to miRBase [28]
From: Macromolecular composition of phloem exudate from white lupin (Lupinus albusL.)
Name | Sequence | Length (nt) | miRNA | Mis matchesa |
|---|---|---|---|---|
Phl71a | UUUGGAUUGAAGGGAGCUC | 19 | Oryza sativa and Arabidopsis miR159 | 0 (2 nt short) |
Phl344d | UGGAGAAGCAGGGCACGUG | 19 | Arabidopsis miR164a,b,c | 0 (2 nt short) |
Phl51a | UCGGACCAGGCUUCAUUCC | 19 | Oryza sativa and Arabidopsis miR166 | 0 (2 nt short) |
Phl187c | UCGGACCAGGCUUCAUUCCC | 20 | Maize miR166c,d,e,f,g,h,i | 0 |
Phl340d | UCGGACCAGGCUUCAUUCC | 19 | Maize miR166b,c,e,f,g,h,i | 0 (1 nt short) |
Phl32c | UCGCUUGGUGCAGGUCGGG | 19 | Arabidopsis miR168a/b | 0 (2 nt short) |
Phl273a | UCGCUUGGUGCAGGUCGGGUU | 21 | Arabidopsis miR168a/b | 2 |
Phl79d | UCGCUUGGUGCAGGUCGGGAA | 21 | Arabidopsis miR168a/b | 0 |
Phl80a | UCGCUUGGUGCAGGUCGGGA | 20 | Arabidopsis miR168a/b | 0 (1 nt short) |
Phl324a | UCGCUUGGUGCAGGUCGGGAA | 21 | Arabidopsis miR168a/b | 0 |
Phl260a | UCGCUUGGUGCAGGUCGGGAA | 21 | Arabidopsis miR168a/b | 0 |
Phl259c | UCGCUUGGCGCAGGUCGGGA | 20 | Arabidopsis miR168a/b | 1 (1 nt short) |
Phl333c | UCGCUUGGCGCAGGUCGGGA | 20 | Arabidopsis miR168a/b | 1 (1 nt short) |
Phl339b | UGAGCCGAGGAUGACUUGCCGG | 22 | Arabidopsis miR169d,e,f,g | 1 (1 extra nt) |
Phl86d | CUGAAGUGUUUGGGGG | 16 | Arabidopsis miR395 | 0 (5 nt short) |
Phl86b | UGCCAAGGGAGAGUUGCC | 18 | Arabidopsis miR399b,c | 1 (3 nt short) |
Phl224b | CGCCAAAGGGGAGUUGCCC | 19 | Poplar trichocarpa miR399l Vitis vinifera miR399i | 1 (2 nt short) |