Prediction of transcriptional regulatory elements for plant hormone responses based on microarray data

BMC Plant Biology

Table 7 List of transcription factor-recognition motifs

Motif name	Transcription factors	Motif	Response	Reference
ACGT	bZIP, PIF, bHLH	ACGT	ABA (ABRE), various environmental stimuli including light (G box) and biotic stress (G box)	[40]
DRE	DREB1/2 (ERF/AP2 subfamily)	CCGAC	Cold, drought	[25]
CGCG	AtSR	CGCG¹	Various stresses	[41]
Myc	Myc	CANNTG	ABA	[42]
Dof	Dof	AAAG	Various regulation	[43]
GCCCA	TCP	GCCCA	Meristematic expression	[6]
H box	MYB	CCTACC	Biotic stress	[44]
W box	WRKY	TTGAC(C/T)	Biotic stress, ABA, senescence	[45]
AACCGG	unknown	AACCGG		[6]
AuxRE	ARF	TGTCTC	Auxin	[46]
GCC box	ERF/AP2	AGCC(A/G)CC	Ethylene, biotic stress	[44]

ISSN: 1471-2229