Association mapping of common bacterial blight resistance QTL in Ontario bean breeding populations

BMC Plant Biology

Table 3 Testing of association between marker loci and common bacterial blight severity using unified MLM (Mixed Linear Model) method

Chr.	CM	Marker^a	14 DAI		21 DAI
			p	*R 2*_marker^b	p	*R 2*_marker
1	135	g934	n.s.		*	0.0061
2	39	g680	***	0.0098	*	0.0094
2	121	g321	***	0.0151	***	0.0141
2	123	g2581	*	0.0065	n.s.
3	14	g1296	**	0.0104	*	0.0072
3	93	g1656	*	0.0076	***	0.0208
5	59	g1689	*	0.0090	**	0.0142
6	13	g1757	n.s.		**	0.0079
6		UBC420	***	0.0136	***	0.0215
6	105	g471	***	0.0227	***	0.0471
6	111	g1436	n.s.		*	0.0049
6	130	g2538	*	0.0075	*	0.0088
7	63	g2531	n.s.		***	0.0126
7	125	g290	***	0.0129	**	0.0085
8		SU91	***	0.0495	***	0.0320
8	46	g1119	**	0.0102	**	0.0136
8	64	g696	n.s.		*	0.0071
8	134	g580	n.s.		*	0.0048
8	166	g1713	**	0.0125	n.s.
8	182	g796	***	0.0128	***	0.0148
9	112	g544	**	0.0101	*	0.0068
9	121	g1286	n.s.		*	0.0045
10	13	g2521	n.s.		*	0.0109
10	59	g2600	**	0.0068	n.s.
11	61	g1215	*	0.0049	n.s.
11	63	g1415	**	0.0073	***	0.0171

^a n.s., not statistically significant; *, P ≤ 0.05; **, P ≤ 0.01; ***, P ≤ 0.001.
^b R²_marker was calculated as the proportion of sum square due to marker after accounting for all other effects in model.

ISSN: 1471-2229