Table 4 Positional candidate genes located in the LG 16 QTL interval for fruit flavanol content detected in the 'Royal Gala' × 'Braeburn' segregating population.
From: QTL and candidate gene mapping for polyphenolic composition in apple fruit
Identifier | Best Arabidopsis match | Possible function | Position (kb) | Gene ID |
|---|---|---|---|---|
C2H2 TF | AT3G18290 | RING finger and CHY zinc finger encoding BRUTUS (BTS), E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency | 1,000 | MDP0000283750 |
C2H2 TF | AT1G68360 | C2H2 and C2HC zinc finger family | 1,020 | MPD0000183099 |
MdMYB7 | AT1G68320 | MYB involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis. | 1,070 | MDP0000659260 |
bHLH | AT1G25330 | bHLH75, BR enhanced | 1,080 | MDP0000725991 |
COL | AT1G68520 | Contans-like light regulation of secondary metabolites | 1,220 | MDP0000185616 |
bZIP | AT1G68640 | HBP-1b(c1), BZIP - PAN is essential for AG activation in early flowering | 1,380 | MDP0000250967 |
MdG2L6 | AT1G25550 | Golden-like ARR18 MYB-related | 1,440 | MDP0000202657 |
MdAP2D36 TF | AT1G68840 | Regulator of vac ATPase Rav2 is part of a complex that has been named 'regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE) | 1,480 | MDP0000939633 |
LAR1 | MdLAR1 | 1,540 | MDP0000376284 | |
bHLH | AT1G68810 | Known bHLH, no other function | 1,550 | MDP0000319726 |
bHLH | AT1G68920 | bHLH49 Known bHLH, no other function | 1,890 | MDP0000154272 |
MdbHLH21 | AT1G69010 | BES1-INTERACTING MYC-LIKE PROTEIN 2 | 1,970 | MDP0000149222 |