BMC Plant Biology

Table 4 **Comparison of N transporter and cysteine peptidases (CPEP) sequence information from full-length cDNA* and RNA-seq data**

From: A putative role for amino acid permeases in sink-source communication of barley tissues uncovered by RNA-seq

Gene family	Raw data		After assembly		Found in H35		New				Overall
	cDNA	RNA- seq	cDNA	RNA- seq	cDNA	RNA- seq	cDNA	Excl.	RNA- seq	Excl.
AAT	99	57	69	55	54	46	15	9	9	3	78
NRT1/PTR	98	71	55	56	42	42	13	8	14	9	71
OPT	27	22	19	20	14	14	9	8	6	5	29
CPEP	120	59	89	59	78	40	11	11	19	19	120

*Matsumoto et al. [40]; numbers of unigenes shown.

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ISSN: 1471-2229

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