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Table 6 LD overview for the whole panel and the subgroups of two-rowed and six-rowed barley

From: Genome-wide association studies for agronomical traits in a world wide spring barley collection

   Total pairs % significant Significant pairs Mean r2 Pairs in complete LD % of pairs in LD > 0.2 Mean of r2> 0.2
Whole panel total 62222 39.4 24567 0.12 59 13.72 0.36
  0-10 cM 10602 62.2 6554 0.20 59 33.70 0.42
  11-20cM 8028 45.1 3626 0.10 0 10.21 0.29
  21-50 cM 19066 38.3 7310 0.09 0 8.40 0.27
  > 50 cM 24526 28.5 7077 0.08 0 4.00 0.25
2-rowed total 48803 21.6 10544 0.18 94 23.74 0.43
  0-10 cM 8183 50.0 4098 0.29 94 48.00 0.48
  11-20cM 6244 29.9 1869 0.13 0 13.31 0.30
  21-50 cM 15066 17.2 2601 0.12 0 9.59 0.28
  > 50 cM 19310 10.2 1976 0.10 0 3.81 0.26
6-rowed total 58356 20.2 11801 0.17 95 22.40 0.36
  0-10 cM 9947 36.8 3661 0.24 95 40.37 0.43
  11-20cM 7439 21.1 1569 0.14 0 18.26 0.27
  21-50 cM 17768 16.9 3016 0.14 0 15.04 0.27
  > 50 cM 23202 15.3 3555 0.13 0 12.14 0.25
  1. LD statistics are given for the total number of locus pairs and for different marker linkage classes (for details see text).