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Table 7 GWAS results for trait heading date

From: Genome-wide association studies for agronomical traits in a world wide spring barley collection

SNP Chr Position MAF P-value -log10(P) R2 (%) Effect QTL Reference QTL Literature
SNP111 1H 128.14 0.19 0.0032 2.49 0.63 -2.51 QTL1_HD HvFT3 [61]
SNP119 1H 138.92 0.23 0.0198 1.70 0.33     
SNP129 2H 27.29 0.37 0.0099 2.00 0.38     
SNP130 2H 28.44 0.36 0.0080 2.10 0. 39 -1.29 QTL2_HD PpdH1 [62]
SNP133 2H 31.02 0.38 0.0280 1.55 0.39     [61]
SNP135 2H 33.73 0.10 0.0262 1.58 0.51     
SNP142 2H 41.66 0.27 0.0096 2.02 0.40     
SNP148 2H 53.53 0.34 0.0043 2.37 0.47 -1.37 QTL3_HD   
SNP170 2H 63.53 0.32 0.0007 3.10 0.88     
SNP174 2H 63.53 0.41 0.0011 2.96 0.68     
SNP177 2H 63.53 0.32 0.0013 2.89 0.55   QTL4_HD HvFT4/eam6 [61, 63, 64]
SNP173 2H 63.53 0.33 0.0033 2.48 0.53     
SNP183 2H 66.83 0.44 0.0265 1.58 0.39 -2.32    
SNP191 2H 71.12 0.44 0.0043 1.0061 0.0012     
SNP196 2H 73.04 0.10 0.0061 2.21 0.65   QTL5_HD eps2 [62]
SNP199 2H 73.75 0.14 0.0012 2.92 0. 49 2.53    
SNP242 2H 115.78 0.39 0.0207 1.68 0. 54 -1.98 QTL6_HD   
SNP284 3H 8.23 0.24 0.0111 1.95 0. 42 -1.45 QTL7_HD   
SNP340 3H 59.89 0.35 0.0047 2.33 0. 38 1.80 QTL8_HD HvGI [61]
SNP520 4H 82.42 0.32 0.0198 1.70 0.47 -1.15 QTL9_HD   
SNP543 4H 123.29 0.26 0.0024 2.62 0.67 -1.59 QTL10_HD   
SNP559 5H 39.97 0.46 0.0146 1.84 0.32 -1.20 QTL11_HD HvCO3 [65]
SNP630 5H 100.28 0.20 0.0203 1.69 0.58     
SNP635 5H 102.06 0.13 0.0278 1.56 0. 34 -2.02 QTL12_HD   
SNP636 5H 103.92 0.28 0.0278 1.56 0. 35     
SNP639 5H 108.18 0.38 0.0236 1.63 0.53     
SNP728 6H 28.39 0.43 0.0132 1.88 0.28 -1.43 QTL13_HD   
SNP778 6H 60.23 0.49 0.0306 1.51 0. 37 -2.15 QTL14_HD   
SNP829 6H 124.85 0.33 0.0281 1.55 0. 37 1.52 QTL15_HD   
SNP854 7H 37.55 0.36 0.0060 2.22 0.57 2.50 QTL16_HD HvFT1 [61, 63]
SNP855 7H 38.32 0.35 0.0009 3.01 0.54     
SNP875 7H 68.46 0.06 0.0180 1.74 0. 48 -2.33 QTL17_HD   
SNP908 7H 84.92 0.35 0.0266 1.58 0. 37 1.66 QTL18_HD HvCO1 [61, 65]
SNP921 7H 104.78 0.35 0.0131 1.88 0.59 -1.79 QTL19_HD   
  1. Significant markers associated for heading date with K-model, corresponding MAF, P value of association, variance explained by marker (R2), effect of the most significant marker within the QTL interval, name of the QTL, and the reference QTL or gene from literature.