Identification of wild soybean miRNAs and their target genes responsive to aluminum stress

BMC Plant Biology

Table 4 Identified targets of the novel miRNAs in wild soybean

miR_name	Target	Alignment score	Cleavage site	Al-treated			Al-free
				Category^a	Percentage of cleavage at the expected site	Reads at cleavage site (tpb)^b	Category	Percentage of cleavage at the expected site	Reads at cleavage site (tpb)	Target gene family
PC-46-5p	Glyma03g33240	1	2649	2	0.50%	96.53				Cation transporting ATPase
	Glyma05g23260	1.5	3244				2	0.68%	121.15	Protein tyrosine kinase
	Glyma13g03270	3.5	1559	2	1.33%	38.61	2	2.01%	60.57	TPR repeat-containing protein
	Glyma14g23650	3.5	961	2	1.06%	38.61	2	1.47%	60.57	TPR repeat-containing protein
	Glyma19g35960	1	2649	2	0.51%	96.53				Cation transporting ATPase
gso-mir167a-p3	Glyma13g04540	3.5	1822	3	0.07%	58.99				Lipase (class3)
PN-mir156f-p3	Glyma03g27590	3	333	2	0.17%	96.53	2	0.17%	121.15	Transcription elongation factor SPT6
	Glyma19g30560	3	206	2	0.14%	96.53	2	0.25%	121.15	Transcription elongation factor SPT6

a, The numbers represent the four category as follows: 0 indicates category I; 1 indicates category II; 2 indicates category III; 3 indicates category IV.
b, tpb, transcripts per billion.

ISSN: 1471-2229