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Table 2 Evidence of SLEEPER gene expression in lower Angiosperms

From: The SLEEPERgenes: a transposase-derived angiosperm-specific gene family

Species

Sleeperdomain 1.

Sleeperdomain 3.

Full length DAYSLEEPER

Persea americana

b4_ep_c61270, b4_c39392

b4_c14697, b4_c9266, b4_ep_c32228

b4_c2641, b4_c7656

Nuphar advena

b3_c39269

b3_c17103, b3_c9604

b3_c707, b3_c1078

Liriodendron tulipifera

b3_c3339, b3_c108364

b3_c2953, b3_c39743

b3_c2953, b3_c21053

Amborella trichopoda

b4_c220959, b4_c97395

b4_c12734

EST hits too short

  1. TBLASTN searches were performed on the EST databases of the AAGP (Ancestral Angiosperm Genome Project; http://ancangio.uga.edu/). Only unique ESTs are shown. The cut-off score for ESTs found with the full-length DAYSLEEPER sequence TBLASTN query is 400. Queries were performed with SLEEPERmotif1 and 3 and the full-length amino acid sequence of DAYSLEEPER.