BMC Plant Biology

Table 2 Polymorphism between H1 and H7 lines used for mapping

From: Hordeum chilense genome, a useful tool to investigate the endosperm yellow pigment content in the Triticeae

Gene	Accession numbers		Polymorphism detection
	H1	H7	Genetic mapping	Physical mapping
Dxr	JQ922078	JQ922079	Allele size	-
Hdr	JQ922096	JQ922097	MboII digestion	MboII digestion
Ggpps1	JQ922098	JQ922099	Allele specific primers	Allele specific primers
Psy2	JQ922084	JQ922085	Allele specific primers	Allele specific primers
Psy3	JQ922082	JQ922083	HhaI digestion	-
Pds	JQ922092	JQ922093	HhaI digestion	-
Zds	JQ922090	JQ922091	HinfI digestion	TasI digestion
e-Lcy	JQ922094	JQ922095	HhaI digestion
b-Lcy	JQ922088	JQ922089	Allele specific primers	-
Hyd3	JQ922080	JQ922081	NheI digestion	-
Ccd1	JQ922086	JQ922087	Allele specific primers	Allele specific primers
Ppo1	JQ922103	JQ922105	Allele size	-
	JQ922104

Polymorphism between H1 and H7 lines of H. chilense used for genetic and physical mapping of the candidate genes selected in this work. GeneBank accession number for each sequence is given. Psy1 is not included as sequencing and mapping have been reported elsewhere.

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ISSN: 1471-2229

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