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Table 5 Genes encoding translation factor and ribosomal protein were down-regulated, whereas ribosomal RNA transcripts are up-regulated in transgenic AC2 expressing tobacco leaves

From: Expression of geminiviral AC2 RNA silencing suppressor changes sugar and jasmonate responsive gene expression in transgenic tobacco plants

EST/mRNA

Fold

Gene description

EST/mRNA

Fold

Gene description

Translation factors

Ribosomal protein (60S)

TA22209_4097

0.43

Nicotiana tabacum Eukaryotic translation initiation factor 3

TA14313_4097

0.45

Nicotiana tabacum L19 ribosomal protein L19

EB437355

0.35

Ricinus communis eukaryotic translation initiation factor 3

L27089

0.42

Petunia x hybrida ribosomal protein L15

DW000860

0.32

Glycine max Elongation factor G, chloroplast precursor

TA11947_4097

0.40

Nicotiana tabacum|Rep: Ribosomal protein L11-like

FG642632

0.25

Arabidopsis thaliana elongation factor P (EF-P)

EH622574

0.45

Nicotiana tabacum ribosomal protein L11

FG198791

0.31

Arabidopsis thaliana SCO1 translation elongation factor

EH619918

0.47

Nicotiana tabacum|Rep: Ribosomal protein L11-like

FG198791

0.35

Ricinus communis translation elongation factor G,

TA13020_4097

0.50

Ribosomal protein S11

EB439252

0.48

Solanum tuberosum ribosome-associated protein p40-like

CV015940

0.42

Ricinus communis ribosomal protein L5

TA16219_4097

0.41

Medicago truncatula Ribosome-binding factor A

FG152141

0.46

Nicotiana tabacum ribosomal protein L3A (RPL3A)

AM746200

0.40

Nicotiana tabacum glutamyl tRNA Reductase

Ribosomal protein (40S)

BP135506

0.48

Ricinus communis lysyl-tRNA synthetase

FG640934

0.27

Zea mays 40S ribosomal protein S21

Ribosomal protein (60S)

EB678225

0.34

Solanum tuberosum 40S ribosomal protein S15

EH622574

0.29

Solanum tuberosum 60S ribosomal protein L21- like protein

TA12310_4097

0.45

Solanum tuberosum 40S ribosomal protein S19-like

DV161940

0.35

Lupinus luteus 60S ribosomal protein L30

DW001420

0.45

Arabidopsis thaliana 40S ribosomal protein S24

CV016994

0.36

Nicotiana tabacum (TSC40-3) 60S ribosomal protein L34

TA18231_4097

0.46

Solanum tuberosum|Rep: Putative 40S ribosomal protein S8

TA14313_4097

0.38

Solanum 60S ribosomal protein L38

DV159788

0.46

Capsicum annuum 40S ribosomal protein S2

CV021750

0.43

Arabidopsis thaliana 60S ribosomal protein L22-2

EB678225

0.47

Solanum tuberosum clone 40S ribosomal protein S15

DW000198

0.43

N.tabacum RL2 60S ribosomal protein L2

TA12310_4097

0.48

Solanum tuberosum 40S ribosomal protein S19

TA12097_4097

0.44

Solanum lycopersicum 60S ribosomal protein L8

EH615086

0.48

Ricinus communis 40S ribosomal protein S8

CV018461

0.45

Nicotiana tabacum (TSC40-4) 60S ribosomal protein L34 mRNA

FG142425

0.49

Ricinus communis 40S ribosomal protein S2

TA15366_4097

0.47

Solanum lycopersicum Similar to 60S ribosomal protein L35

FG642795

0.49

Arabidopsis thaliana 40S ribosomal protein S20 (RPS20B)

TA13593_4097

0.48

Arabidopsis thaliana 60S ribosomal protein L41

TA12892_4097

0.49

Solanum demissum 40S ribosomal protein S9

TA12097_4097

0.48

Solanum lycopersicum 60S ribosomal protein L8

TA13535_4097

0.49

Solanum tuberosum 40S ribosomal protein S4

TA14313_4097

0.48

Solanum|Rep: 60S ribosomal protein L38

Ribosomal RNA

L27089

0.48

Nicotiana tabacum (TSC40-3) 60S ribosomal protein

TA19036_4097

9.62

Nicotiana tabacum 18S ribosomal RNA gene, nuclear

TA11947_4097

0.50

Capsicum annuum 60S ribosomal protein L19

TA12851_4097

6.62

Coffea arabica 26S ribosomal RNA gene, mitochondrial

EH622574

0.50

Solanum tuberosum 60S ribosomal protein L21- like protein

TA17274_4097

4.28

Nicotiana sylvestris 5.8S rRNA gene

EH619918

0.47

Solanum tuberosum clone 106F12 ribosomal protein L38

TA19143_4097

3.78

Nicotiana tabacum 18S ribosomal RNA gene, nuclear

TA13020_4097

0.50

Glycine max Ribosomal protein L37

TA16088_4097

3.17

Olpidium brassicae 28S ribosomal RNA gene, nuclear 25S rRNA

CV015940

0.47

Nicotiana glutinosa ribosomal protein L31

TA11649_4097

0.33

Nicotiana tabacum chloroplast 16S 23S ribosomal RNA gene

FG152141

0.48

Solanum tuberosum ribosomal protein L27a-like

   

DV157967

0.47

Nicotiana tabacum ribosomal protein L25

   

TA12097_4097

0.34

Medicago truncatula Ribosomal protein L24E

   
  1. Fold change is indicated as a ratio of AC2/WT calculated from normalized median intensity values (n = 3).