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Table 1 Reference and size of the analyzed genomes

From: The Plant Short-Chain Dehydrogenase (SDR) superfamily: genome-wide inventory and diversification patterns

Species

Taxa

Annotation used

Number of loci

Reference

Chlamydomonas reinhardtii

Chlorophyte

Chlre4.1_Augustus9

15935

[9]

Physcomitrella patens

Moss

proteins. Phypa1_1.FilteredModels

35938

[10]

Selaginella moellendorffii

Lycophyte

Selmo1_GeneModels_FilteredModels3

22285

[11]

Arabidopsis thaliana

Eudicot

TAIR9

27379

[7]

Populus trichocarpo

Eudicot

Populus.trichocarpa.v2.0

41377

[12]

Vitis vinifera

Eudicot

12X March 2010 release

26346

[13]

Glycine max

Eudicot

Glyma1_pacId

46367

[14]

Oryza sativa

Monocot

MSU Rice Genome Annotation (Osa1) Release 6.1

40577

[15]

Zea mays

Monocot

ZmB73_4a.53_working_translations

102202

[16]

Sorghum bicolor

Monocot

Sorbi1_GeneModels_Sbi1_4_aa

34496

[17]

  1. The number of loci corresponds to the protein coding genes predicted by the annotation.