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Table 3 The positions of SNPs and InDels identified among 5 LMW-i type genes*

From: Molecular characterization of LMW-GS genes in Brachypodium distachyon L. reveals highly conserved Glu-3 loci in Triticum and relatedspecies

LMW-GS

38

251

275

346

349-350

352-353

355

391

397-404

464

789

1116

1040

1117

HQ220190

C

A

A

-

--

--

-

-

--------

T

G

A

A

T

HQ220195

T

G

A

C

CA

CA

C

T

CAACAACA

T

G

G

A

C

HQ220191

C

A

G

C

CA

CA

C

T

CAACAACA

T

G

A

G

T

HQ220193

C

A

A

C

CA

CA

C

T

CAACAACA

C

C

A

A

T

HQ220197

C

A

A

C

CA

CA

C

T

CAACAACA

T

G

A

A

C

23 other

              

LMW-m Genes

C

A

A

C

CA

CA

C

T

CAACAACA

T

G

A

A

T

  1. *Horizontal dashes indicated the deletions of nucleotide. Other 23 LMW-i genes from GenBank included GQ870245 (Ae. markgrafii), GQ870242 (Ae. umbellulata), GQ870246 (Ae. speltoides), EU594331, EU594335 and EU594336 (Ae. comosa), EF536030 (Ae. juvenalis), EF536035 (Ae. geniculata), AY606257 and AY724436 (L. elongatum), GQ870247 (T. urartu), DQ217661 and DQ217663 (T. turgidum subsp. dicoccoides), DQ345449 (T. monococcum L.), AY453154, AY453155, AY453157, AY453160, EU189087, FJ549932, FJ755303, FJ755304 and AB062877 (T. aestivum).
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BMC Plant Biology

ISSN: 1471-2229

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