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Table 4 Top 50 up-regulated unigenes of C. bungeana by chilling stress. The homologs of Arabidopsis genes were presented for functional description of unigenes

From: Deep-sequencing transcriptome analysis of chilling tolerance mechanisms of a subnival alpine plant, Chorispora bungeana

Unigene

log2 (Fold change)

AGI

Functional description

CBT13817

7.47

AT2G42540

cold-regulated 15a (COR15A)

CBT52238

6.67

-

-

CBT6902

6.32

AT5G64750

ABA REPRESSOR1 (ABR1)

CBT7920

6.13

-

-

CBT13614

6.10

AT5G63450

cytochrome P450, family 94, subfamily B, polypeptide 1 (CYP94B1)

CBT4773

6.10

AT5G62360

Plant invertase/pectin methylesterase inhibitor superfamily protein

CBT52823

6.06

-

-

CBT22908

5.91

AT1G22810

Integrase-type DNA-binding superfamily protein

CBT13319

5.51

AT1G07150

mitogen-activated protein kinase kinase kinase 13 (MAPKKK13)

CBT47699

5.46

-

-

CBT15934

5.40

AT2G38240

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

CBT47787

5.37

-

-

CBT47948

5.36

AT5G65140

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

CBT11719

5.25

AT5G17460

unknown protein

CBT25137

5.25

AT1G19670

chlorophyllase 1 (CLH1)

CBT22504

5.19

AT5G63450

cytochrome P450, family 94, subfamily B, polypeptide 1 (CYP94B1)

CBT45404

5.13

-

-

CBT19519

5.08

-

-

CBT1251

5.06

AT3G02990

heat shock transcription factor A1E (HSFA1E)

CBT22708

5.06

AT5G45860

PYR1-like 11 (PYL11)

CBT22442

5.05

AT4G34131

UDP-glucosyl transferase 73B3 (UGT73B3)

CBT28264

4.97

AT4G01870

tolB protein-related

CBT26921

4.97

AT1G11925

Stigma-specific Stig1 family protein

CBT11679

4.93

AT1G02400

gibberellin 2-oxidase 6 (GA2OX6)

CBT14428

4.92

AT3G06490

myb domain protein 108 (MYB108)

CBT19682

4.91

AT5G38780

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

CBT34609

4.90

-

-

CBT47700

4.89

-

-

CBT48057

4.83

-

-

CBT6326

4.79

AT3G04010

O-Glycosyl hydrolases family 17 protein

CBT17469

4.79

AT4G14690

EARLY LIGHT-INDUCIBLE PROTEIN 2 (ELIP2)

CBT47754

4.76

AT1G25220

anthranilate synthase beta subunit 1 (ASB1)

CBT1612

4.74

AT5G52300

LOW-TEMPERATURE-INDUCED 65 (LTI65)

CBT29537

4.73

AT2G33710

Integrase-type DNA-binding superfamily protein

CBT3801

4.68

AT1G57990

purine permease 18 (PUP18)

CBT17111

4.64

AT5G67600

unknown protein

CBT8371

4.61

AT2G46950

cytochrome P450, family 709, subfamily B, polypeptide 2 (CYP709B2)

CBT21020

4.61

-

-

CBT28985

4.59

AT1G65690

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

CBT336

4.59

AT3G24900

receptor like protein 39 (RLP39)

CBT845

4.57

AT2G34930

disease resistance family protein / LRR family protein

CBT18111

4.55

AT1G05530

UDP-glucosyl transferase 75B2 (UGT75B2)

CBT45699

4.55

-

-

CBT9147

4.52

-

-

CBT37125

4.51

-

-

CBT47516

4.50

AT2G43840

UDP-glycosyltransferase 74 F1 (UGT74F1)

CBT7419

4.50

AT1G64380

Integrase-type DNA-binding superfamily protein

CBT51514

4.47

-

-

CBT2368

4.46

-

-

CBT7125

4.44

AT1G26390

FAD-binding Berberine family protein