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Table 2 Frequency of different type of motif in dinucleotide and trinucleotide SSRs

From: Identification and characterization of gene-based SSR markers in date palm (Phoenix dactylifera L.)

Type of motif

Number of SSR

Frequency (%)

AT/TA

31

5.4*

AG/GA/CT/TC

493

85.7

AC/CA/TG/GT

47

8.2

GC/CG

4

0.7

AAG/AGA/GAA/CTT/TTC/TCT

805

19.3**

AAT/ATA/TAA/ATT/TTA/TAT

22

0.5

ATG/TGA/GAT/CAT/ATC/TCA

438

10.5

AAC/ACA/CAA/GTT/TTG/TGT

99

2.4

ACC/CCA/CAC/GGT/GTG/TGG

414

9.9

AGG/GGA/GAG/CCT/CTC/TCC

1,119

26.8

AGT/GTA/TAG/ACT/CTA/TAC

38

0.9

AGC/GCA/CAG/GCT/CTG/TGC

673

16.1

ACG/CGA/GAC/CGT/GTC/TCG

178

4.3

GGC/GCG/CGG/GCC/CCG/CGC

385

9.2

  1. *Frequency of motifs in total number of dinucleotide SSRs.
  2. **Frequency of motifs in total number of trinucleotide SSRs.