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Table 3 Read counts of known miRNA in each library

From: Genome-wide identification of alternate bearing-associated microRNAs (miRNAs) in olive (Olea europaeaL.)

miRNA_Name

UF

RF

NON

NOFF

JON

JOFF

oeu_miR156a

90,292

39,031

124,269

643,286

339,746

311,706

oeu_miR156b

90,252

39,016

124,180

643,040

339,621

311,629

oeu_miR156c

90,292

39,031

124,269

643,286

339,746

311,706

oeu_miR156d

90,218

39,076

124,178

643,011

339,606

311,576

oeu_miR156e

90,218

39,076

124,178

643,011

339,606

311,576

oeu_miR156f

90,292

39,031

124,269

643,286

339,746

311,706

oeu_miR156g

24,167

16,890

100,442

172,856

193,886

130,260

oeu_miR156h

24,044

16,818

100,233

172,426

193,558

129,940

oeu_miR156i

24,167

16,890

100,442

172,856

193,886

130,260

oeu_miR156j

24,167

16,890

100,442

172,856

193,886

130,260

oeu_miR156k

78

31

135

691

337

306

oeu_miR159a

605

363

2,593

3,673

1,908

7,809

oeu_miR159b

605

363

2,591

3,673

1,909

7,808

oeu_miR159c

605

363

2,593

3,673

1,908

7,809

oeu_miR159d

1

0

0

2

2

0

oeu_miR160a

4

2

4

83

18

109

oeu_miR160b

2

2

1

69

11

98

oeu_miR160c

2

2

1

69

11

98

oeu_miR160d

4

2

4

83

18

109

oeu_miR160g

0

0

0

1

0

0

oeu_miR164a

63

28

1,577

2,050

3,133

4,902

oeu_miR164b

63

28

1,575

2,046

3,136

4,896

oeu_miR164c

63

28

1,575

2,046

3,131

4,895

oeu_miR164d

63

28

1,577

2,050

3,133

4,902

oeu_miR164e

64

28

1,602

2,066

3,166

4,955

oeu_miR164f

1

2

0

0

0

1

oeu_miR166a

127,248

52,310

419,523

491,358

542,522

306,999

oeu_miR166b

127,229

52,256

419,792

491,598

543,180

307,541

oeu_miR166c

127,212

52,264

419,434

491,303

542,458

306,940

oeu_miR166d

127,249

52,247

419,941

491,769

543,446

307,715

oeu_miR166e

127,229

52,256

419,792

491,598

543,180

307,541

oeu_miR166f

127,249

52,247

419,941

491,769

543,446

307,715

oeu_miR166g

130,974

55,055

435,594

510,783

560,419

317,070

oeu_miR166h

130,974

55,056

435,594

510,783

560,419

317,070

oeu_miR166i

127,266

52,249

419,710

491,618

542,907

307,162

oeu_miR166j

127,334

52,402

419,709

491,540

542,715

307,163

oeu_miR166k

127,334

52,402

419,709

491,540

542,715

307,163

oeu_miR166l

127,266

52,249

419,710

491,618

542,907

307,162

oeu_miR166m

130,970

55,036

435,737

510,951

560,657

317,213

oeu_miR166n

8,529

6,286

18,521

23,769

21,358

15,080

oeu_miR166o

8,529

6,285

18,521

23,769

21,358

15,080

oeu_miR166p

2

0

3

13

11

10

oeu_miR166q

8,538

6,292

18,512

23,768

21,362

15,078

oeu_miR167a

19

13

359

141

318

412

oeu_miR167b

7

7

349

133

302

404

oeu_miR167c

19

13

360

141

318

412

oeu_miR167d

7

7

349

133

302

404

oeu_miR167e

31

7

204

200

492

427

oeu_miR167f

57

40

18,541

22,195

41,904

26,123

oeu_miR167g

57

40

18,598

22,204

41,915

26,140

oeu_miR168a

22,1292

157,636

163,173

198,720

108,056

95,642

oeu_miR168b

22,1753

158,132

163,292

198,885

108,320

95,878

oeu_miR169a

4

7

2

5

3

13

oeu_miR169b

4

7

2

5

3

13

oeu_miR169c

4

7

2

5

3

13

oeu_miR169d

0

0

48

41

42

59

oeu_miR169e

0

0

48

41

42

59

oeu_miR169f

0

0

50

41

41

59

oeu_miR169g

0

0

48

41

42

59

oeu_miR169h

0

0

48

41

42

59

oeu_miR169i

0

0

0

0

1

1

oeu_miR169j

0

0

0

0

1

1

oeu_miR169k

0

0

0

0

1

1

oeu_miR169l

0

0

0

0

1

1

oeu_miR169m

0

0

0

0

1

1

oeu_miR169r

0

0

0

0

2

10

oeu_miR169s

0

0

48

41

42

59

oeu_miR169v

0

0

0

0

1

1

oeu_miR169w

0

0

0

0

1

1

oeu_miR171a

33

17

12

12

9

12

oeu_miR171b

33

17

12

12

9

12

oeu_miR171c

0

0

4

0

3

3

oeu_miR171d

0

0

4

0

3

3

oeu_miR171e

33

17

12

12

9

11

oeu_miR171f

33

17

12

12

9

11

oeu_miR171g

33

17

13

12

9

12

oeu_miR171h

33

17

13

12

9

12

oeu_miR171i

33

17

12

12

9

11

oeu_miR172a

359

201

5,070

3,060

3,372

2,545

oeu_miR172b

359

202

5,070

3,060

3,373

2,545

oeu_miR172c

359

201

5,070

3,060

3,372

2,545

oeu_miR172d

3

1

6

12

14

9

oeu_miR172e

3

1

6

12

14

9

oeu_miR172f

359

202

5,070

3,060

3,373

2,545

oeu_miR172g

0

0

3

2

1

4

oeu_miR172h

0

0

3

2

1

4

oeu_miR172i

11

6

121

67

89

66

oeu_miR319a

0

0

0

1

2

6

oeu_miR319b

0

0

0

1

2

5

oeu_miR319c

0

0

1

2

2

7

oeu_miR319d

0

0

1

2

2

7

oeu_miR319e

0

0

0

2

0

5

oeu_miR319f

0

0

1

3

0

8

oeu_miR319g

0

0

1

3

0

8

oeu_miR319h

0

0

0

2

0

5

oeu_miR390a

114

109

87

176

105

97

oeu_miR390b

113

108

87

176

105

97

oeu_miR390c

114

109

87

176

105

97

oeu_miR390d

113

108

87

176

105

97

oeu_miR393a

0

7

2

1

2

4

oeu_miR393b

0

7

2

1

2

4

oeu_miR393c

16

57

132

215

341

509

oeu_miR393d

16

57

132

215

341

509

oeu_miR394a-5p

0

0

0

9

5

4

oeu_miR394b-5p

0

0

0

9

5

5

oeu_miR395b

16

1

2

13

96

39

oeu_miR395c

16

1

2

13

96

39

oeu_miR395d

16

1

2

13

96

39

oeu_miR395e

16

1

2

13

96

40

oeu_miR395f

16

1

2

13

96

40

oeu_miR395g

16

1

2

13

96

39

oeu_miR395h

16

1

2

13

96

39

oeu_miR395i

16

1

2

13

96

39

oeu_miR395j

16

1

2

13

96

39

oeu_miR396a

36

36

1,367

786

1,051

832

oeu_miR396b

36

36

1,367

786

1,051

832

oeu_miR396c

39

73

296

171

276

278

oeu_miR396d

39

73

296

171

276

278

oeu_miR396e

39

74

296

172

276

278

oeu_miR396f

0

0

222

61

90

357

oeu_miR396g

0

0

269

95

116

525

oeu_miR397a

6

6

71

163

246

300

oeu_miR397b

0

0

0

1

0

2

oeu_miR398b

0

1

2

9

9

10

oeu_miR398c

0

1

2

9

9

10

oeu_miR399b

0

0

0

0

0

1

oeu_miR399c

0

0

0

0

0

1

oeu_miR399f

0

0

0

0

0

2

oeu_miR399g

0

0

0

0

0

1

oeu_miR399i

9

10

2

7

23

39

oeu_miR403a

121

105

945

968

1,360

1,130

oeu_miR403b

121

105

941

966

1,359

1,125

oeu_miR403c

121

105

941

966

1,357

1,124

oeu_miR408

1

2

5

60

70

97

oeu_miR530a

0

0

0

1

1

0