From: Sequencing-based variant detection in the polyploid crop oilseed rape
Reads | 4 | 5 | 6 | Average |
---|---|---|---|---|
Total | 62,071,296 | 38,839,694 | 69,785,822 | 56,898,937 |
Spike | 3,128,126 | 1,554,316 | 3,693,148 | 2,791,863 |
Unmatched | 23,262,622 | 12,912,128 | 22,169,416 | 19,448,055 |
M13 detected | 17,840,274 | 12,186,625 | 21,961,629 | 17,329,509 |
6 bp BAT | 15,859,982 | 11,258,110 | 19,398,277 | 15,505,456 |
5 bp BAT | 591,667 | 338,953 | 984,976 | 638,532 |
4 bp BAT | 304,755 | 127,279 | 440,769 | 290,934 |
<4 bp BAT | 788,808 | 302,764 | 891,331 | 660,968 |
Munged | 32,925,286 | 23,213,290 | 40,815,100 | 32,317,892 |
Mapped BnaA.FAD2.a | 1,566,912 | 1,420,311 | 2,143,813 | 1,710,345 |
Mapped BnaA.FAD2.b | 6,579,001 | 4,804,826 | 8,002,197 | 6,462,008 |
Mapped BnaC.FAD2.a | 791,572 | 644,265 | 1,026,912 | 820,916 |
Mapped BnaC.GL2.b | 12,302,580 | 6,167,201 | 15,136,272 | 11,202,018 |