Table 2 Transcription factor genes showing a transcript level fold-change ≥ ; 2 between consecutive stages of embryo development

1

6.3.22.5

20408

AT4G38620

7E-72

R2R3 MYB protein 4 (MYB4)

D0 → D5

2.7

-

-

D5 → D11

2.4

1

12.1.13.17

7865

AT3G54390

2E-45

Sequence-specific DNA binding protein

D0 → D5

2.2

-

-

1

6.4.7.23

1862

AT1G68920

8E-56

Basic helix-loop-helix (bHLH) DNA-binding superfamily protein

D0 → D5

2.1

-

-

6

8.2.2.4

1030

AT1G32240

8E-41

KANADI family transcription factor 2 (KAN2)

D0 → D5

2.1

-

-

1

6.1.20.1

27680

AT4G37750

2E-96

AINTEGUMENTA (ANT)

D5 → D11

2.4

-

-

3

10.3.2.2

2388

AT1G08465

1E-41

YABBY family protein 2 (YAB2)

D11 → D15

2.2

-

-

3

3.3.10.21

57615

AT1G12540

3E-13

Basic helix-loop-helix (bHLH) DNA-binding superfamily protein

D11 → D15

2.0

-

-

D15 → D25

4.2

3

1.1.20.3

37794

AT3G49950

5E-46

GRAS family transcription factor

D15 → D25

2.0

-

-

3

2.3.14.1

25514

AT1G52880

4E-53

ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 18 (ANAC018), NO APICAL MERISTEM/SEED MORPHOLOGY 2 (NAM/NARS2)

D15 → D25

2.3

-

-

3

2.4.19.23

17360

AT1G22640

1E-150

MYB-type transcription factor 3 (MYB3)

D15 → D25

2.3

-

-

3

2.4.7.21

2808

AT4G29230

7E-98

NAC-domain protein 75 (ANAC075)

D15 → D25

2.4

-

-

3

3.1.19.21

12873

AT5G47390

4E-71

MYB-like transcription factor

D15 → D25

2.0

-

-

3

3.2.1.2

16071

AT1G01720

7E-75

NAC-domain protein 2 (ANAC002), ATAF1

D15 → D25

2.7

-

-

3

4.4.11.10

270

AT3G20910

6E-31

Nuclear factor Y subunit A9 (NF-YA9)

D15 → D25

2.0

-

-

3

5.2.18.9

16530

AT5G54680

1E-54

Basic helix-loop-helix (bHLH) 105 (BHLH105), LEUCINE RESISTANT 3 (ILR3)

D15 → D25

4.1

-

-

2

1.3.17.22

8657

AT2G18160

2E-14

Basic leucine-zipper 2 (BZIP2), FLORAL TRANSITION AT THE MERISTEM 3 (FTM3)

-

-

D0 → D5

3.3

2

5.1.1.2

37241

AT4G18170

2E-27

WRKY transcription factor 28 (WRKY28)

-

-

D0 → D5

2.1

5

5.3.10.21

2451

AT4G30080

3E-151

Auxin response factor 16 (ARF16)

-

-

D0 → D5

20.9

6

1.4.9.14

22607

AT3G24140

1E-51

bHLH superfamily protein FAMA

-

-

D15 → D25

2.2

4

10.3.12.3

17529

AT2G12646

3E-67

PLATZ transcription factor family protein

-

-

D15 → D25

3.0

6

3.3.17.13

7237

AT1G65620

1E-56

ASYMMETRIC LEAVES 2 (AS2)

-

-

D15 → D25

3.2

4

4.3.3.12

4970

AT1G56170

4E-56

Nuclear factor Y subunit C2 (NF-YC2), HAP5B

-

-

D15 → D25

2.7

4

4.4.11.2

18019

AT3G19500

2E-31

bHLH DNA-binding superfamily protein

-

-

D15 → D25

2.5

1

6.4.7.23

1862

AT1G68920

8E-56

bHLH DNA-binding superfamily protein

-

-

D15 → D25

2.1