Novel miRNA | Novel miRNA sequence | Length | miRNA count | Genomic location of pre-miRNA | MFE | miR* | miR* count | ||
---|---|---|---|---|---|---|---|---|---|
CL | TL | CL | TL | ||||||
tsa-miRn1 | GGAGGAUGAUACAAGCUCUCAUA | 23 | 24 | 0 | scaffold_10:7369671:7369761:+ | -18.5 | CUUCAACAUUAGAAUGCAUGUAUC | 1 | 0 |
tsa-miRn2 | UAGGAAUCUGUGCUCAAACCAC | 22 | 18 | 22 | scaffold_11:1867622:1867724:+ | -57.1 | UUGAGCACAGAUUUCUACA | 1 | 1 |
tsa-miRn3-5p | UUGGGGGUAAGAGUAUUAUAC | 21 | 78 | 72 | scaffold_13:6097671:6097798:- | -46.1 | UAUAAUACCCUUAAACCCAAU | 10 | 10 |
tsa-miRn3-3p | UAUAAUACCCUUAAACCCAAU | 21 | 10 | 10 | UUGGGGGUAAGAGUAUUAUAC | 78 | 72 | ||
tsa-miRn4 | UGUUCGCCGGAAAAUAACCAG | 21 | 47 | 55 | scaffold_15:2449702:2449784:+ | -48.2 | GGUUAUUUUCCGGCGAAGCAGA | 1 | 0 |
tsa-miRn5 | UUUUAAAACUGAAAACGUAAU | 21 | 92 | 77 | scaffold_15:2733677:2733793:+ | -45.3 | UACGUUAUCAGUUUUAAAACA | 1 | 1 |
tsa-miRn6 | AUUGGAGUUGAUAUAAUGCAG | 21 | 0 | 10 | scaffold_9:4431521:4431709:+ | -71.2 | CAACCUGCAUUAUAUCAACUC | 0 | 1 |
tsa-miRn7 | CAAGGCAGAAGAAGGCUGUUU | 21 | 1927 | 0 | scaffold_19:2418388:2418480:+ | -63.1 | ACAGCCUCUUCUUCCUUGUU | 1 | 0 |
tsa-miRn8-5p | AAUGAAUGAUGCGGUAGACAAAU | 23 | 123 | 71 | scaffold_1:6999873:6999998:- | -36 | UAGCUUCCGACUCAUUCAUCCA | 13 | 9 |
tsa-miRn8-3p | UAGCUUCCGACUCAUUCAUCCA | 22 | 13 | 9 | AAUGAAUGAUGCGGUAGACAAAU | 123 | 71 | ||
tsa-miRn9 | AGGAGAGUUUUGGUGUAGCAA | 21 | 21 | 23 | scaffold_229:434:568:- | -30.7 | UUCUAUGCUCAGAACUCCUUCUU | 0 | 1 |
tsa-miRn10 | UGAAUUUGAUUUUAGACAGGA | 21 | 26 | 0 | scaffold_2:7409777:7409908:+ | -57.1 | UGUCUGAAAUCAGGUUCAGGUA | 1 | 0 |
tsa-miRn11-3p | UGAGUCGUCAAUCAGUAAGGU | 21 | 228 | 247 | scaffold_2:8810421:8810518:+ | -34.9 | AUUACUUGUUGACGAUUCCUU | 252 | 133 |
tsa-miRn11-5p | AUUACUUGUUGACGAUUCCUU | 21 | 252 | 133 | scaffold_2:8810421:8810518:+ | UGAGUCGUCAAUCAGUAAGGU | 228 | 247 | |
tsa-miRn12 | UGAUAGCAGUAGUUUCGUCUA | 21 | 192 | 172 | scaffold_2:856191:856302:- | -23.5 | AGAGAUCGGAGCUUUGUUGG | 1 | 0 |
tsa-miRn13 | UAGUGAAAUUGGAAAGUUGCC | 21 | 3777 | 2846 | scaffold_2:6151436:6151550:- | -49 | AACGACAGCUUUCCUGAUUCCA | 2 | 1 |
tsa-miRn14 | UCAUGAAGGAUCUGAGAUUGA | 21 | 78 | 0 | scaffold_2:18154827:18154925:- | -48.1 | CUCCAGUCUCAUACUCUUCAU | 2 | 0 |
tsa-miRn15 | CUAGGGUUCCAGAAUUGAGGCUA | 23 | 57 | 32 | scaffold_3:8786082:8786170:+ | -26.4 | GCUUUAAUUCGGAGUUGGUCGGC | 1 | 1 |
tsa-miRn16 | UGUGAUCCUCAGAUAGACGUACA | 23 | 4 | 10 | scaffold_3:10218595:10218739:+ | -38.3 | AGUUGUCAUUAUAUCUCUGAUCGC | 0 | 2 |
tsa-miRn17 | ACCCCAAACCAGCUCAGACAA | 21 | 142 | 263 | scaffold_3:2561950:2562105:- | -67.7 | CAGCUUAUUUGGGAUUGGAGGUC | 0 | 3 |
tsa-miRn18 | UGGAUUUAGAAUAAUGGUGGCUA | 23 | 127 | 118 | scaffold_4:1893254:1893541:+ | -47.63 | AUCAUUGCUCUGAUACCAUGUUGA | 2 | 3 |
tsa-miRn19 | AAGGCUGUGAAUUGUUUUGGC | 21 | 167 | 116 | scaffold_7:7785014:7785113:- | -57.26 | CGAAACAAUUCACAGUCUUGA | 0 | 1 |
tsa-miRn20-3p | AAAGCAUGUGAGUACUUCGUA | 21 | 639 | 523 | scaffold_9:9328524:9328666:- | -71.2 | UGAAAUAUUCACAUGCUUUCG | 357 | 439 |
scaffold_9:9328524:9328666:- | -71.2 | ||||||||
tsa-miRn20-5p | UGAAAUAUUCACAUGCUUUCG | 21 | 357 | 439 | AAAGCAUGUGAGUACUUCGUA | 639 | 523 | ||
tsa-miRn21 | UGAAAGGAAACAUUGAUGUUU | 21 | 0 | 82 | scaffold_15:1338317:1338445:- | -50.1 | ACAACAGUGUUUUCUUUCACA | 0 | 9 |
tsa-miRn22 | UUGUGCAAGACUGAGAAGCAA | 21 | 0 | 10 | scaffold_5:15200075:15200174:+ | -57.5 | UCUUCUUCCUCUUGCACAACC | 0 | 1 |