From: Bidirectional promoters in seed development and related hormone/stress responses
FWgene | RVgene | len | DRE | CE3 | FWgene annotation | RVgene annotation | FWlocation | RVlocation |
---|---|---|---|---|---|---|---|---|
AT1G04635 | AT1G04630 | 202 | y | AtPOP5 | maternal effect embryo arrest 4 (MEE4) | nucleolus | mitochondrion | |
AT1G07510 | AT1G07500 | 347 | FtsH10 protease | unknown protein | mitochondrion | cytosol | ||
AT1G07660 | AT1G07645 | 452 | Histone superfamily | vicinal oxygen chelate (VOC) metalloenzyme | nucleus | cytosol | ||
AT1G07985 | AT1G07980 | 478 | Expressed protein | nuclear factor Y, subunit C10 | nucleus | plastid | ||
AT1G15330 | AT1G15320 | 333 | Cystathionine beta-synthase (CBS) | unknown protein | cytosol | extracellular | ||
AT1G16740 | AT1G16730 | 378 | Ribosomal protein L20 | unknown protein 6 (UP6) | mitochondrion | nucleus | ||
AT1G19980 | AT1G19970 | 327 | cytomatrix protein-related | ER lumen protein retaining receptor family | nucleus | ER | ||
AT1G28540 | AT1G28530 | 164 | unknown protein | unknown protein | cytosol | plastid | ||
AT1G31420 | AT1G31410 | 259 | y | LRR kinase (FEI1) | putrescine-binding transporter protein | membrane | plastid | |
AT1G32560 | AT1G32550 | 367 | y | LEA4-1 | Ferredoxin C2 | nucleus | plastid | |
AT1G48840 | AT1G48830 | 264 | y | unknown function (DUF639) | Ribosomal protein S7e family | membrane | cytosol | |
AT1G50440 | AT1G50430 | 161 | RING/FYVE/PHD zinc finger | DWARF 5 (DWF5) -STEROL DELTA7 REDUCTASE | nucleus | membrane | ||
AT1G52230 | AT1G52220 | 139 | PHOTOSYSTEM I SUBUNIT H2 | unknown protein | plastid | plastid | ||
AT1G54870 | AT1G54860 | 375 | ChlADR aldehyde reductase | Glycoprotein membrane GPI-anchored | cytosol | extracellular | ||
AT1G56170 | AT1G56165 | 391 | CCAAT motif binding complex | non-coding RNA | nucleus | cytosol | ||
AT1G61790 | AT1G61780 | 237 | Oligosaccharyltransferase | postsynaptic protein-related | ER | nucleus | ||
AT1G65140 | AT1G65130 | 595 | Ubiquitin c-terminal hydrolase | Ubiquitin c-terminal hydrolase | cytosol | nucleus | ||
AT1G71090 | AT1G71080 | 370 | Auxin efflux carrier | RNA pol II transcription elongation factor | membrane | nucleus | ||
AT1G72030 | AT1G72020 | 434 | Acyl-CoA N-acyltransferase | unknown protein | plastid | mitochondrion | ||
AT1G77370 | AT1G77360 | 307 | Glutaredoxin | Tetratricopeptide repeat (TPR)-like | extracellular | mitochondrion | ||
AT2G20490 | AT2G20480 | 189 | NOP10; EDA27 (RNA binding) | unknown protein | nucleolus | nucleus | ||
AT2G25890 | AT2G25880 | 470 | Oleosin | Ser/Thr kinases - Ataurora2 (AUR2) | lipid body | nucleus | ||
AT2G29560 | AT2G29550 | 523 | phosphoenolpyruvate enolase | beta-tubulin (TUB7) | cytosol | nucleus | ||
AT2G38040 | AT2G38025 | 385 | y | acetyl-CoA carboxylase subunit | Cysteine proteinase superfamily | plastid | plastid | |
AT2G38660 | AT2G38650 | 183 | Amino acid dehydrogenase | galacturonosyltransferase 7 (GAUT7) | mitochondrion | golgi | ||
AT2G39460 | AT2G39450 | 331 | y | 60S ribosomal protein L23aA | manganese transporter | cytosol | golgi | |
AT2G43190 | AT2G43180 | 187 | AtPOP4 (RNA processing) | Phosphoenolpyruvate carboxylase family | nucleolus | plastid | ||
AT2G45740 | AT2G45730 | 556 | y | peroxin11 (PEX11) family | eukaryotic initiation factor 3 ⊠subunit | peroxisome | cytosol | |
AT3G03160 | AT3G03150 | 264 | y | y | unknown protein | unknown protein | endomembrane | mitochondrion |
AT3G03320 | AT3G03310 | 135 | RNA-binding protein | lecithin:cholesterol acyltransferase 3 | cytosol | plasma membrane | ||
AT3G12320 | AT3G12300 | 580 | y | unknown protein | unknown protein | nucleus | cytosol | |
AT3G13190 | AT3G13180 | 559 | unknown function (DUF827) | rRNA small subunit methyltransferase B | nucleus | plastid | ||
AT3G14340 | AT3G14330 | 305 | unknown protein | Tetratricopeptide repeat (TPR)-like | membrane | mitochondrion | ||
AT3G15290 | AT3G15280 | 304 | 3-hydroxyacyl-CoA DH | unknown protein | peroxisome | mitochondrion | ||
AT3G16010 | AT3G16000 | 197 | PPR-like superfamily | plastid DNA-binding protein; MFP1 | mitochondrion | plastid | ||
AT3G18215 | AT3G18210 | 245 | unknown function, DUF599 | 2OG and Fe(II)-dependent oxygenase | membrane | nucleus | ||
AT3G26618 | AT3G26616 | 464 | eukaryotic release factor 1-3 | unknown protein | cytosol | cytosol | ||
AT3G52230 | AT3G52220 | 139 | unknown protein | Kinase phosphorylation domain | plastid | nucleus | ||
AT3G53180 | AT3G53170 | 477 | glutamate-ammonia ligases | Tetratricopeptide repeat (TPR)-like | cytosol | cytosol | ||
AT3G59500 | AT3G59490 | 190 | HRF1 family protein | unknown protein | ER membrane | nucleus | ||
AT4G00030 | AT4G00026 | 168 | Plastid-lipid associated (PAP) | SD3 (Segregation Distortion 3); TIM21 | plastid | mitochondrion | ||
AT4G01270 | AT4G01265 | 577 | y | RING/U-box superfamily | raffinose synthase family pseudogene | nucleus | NA | |
AT4G02430 | AT4G02425 | 189 | y | S/R-Rich Protein Splicing Factors | unknown protein | nucleus | nucleus | |
AT4G11985 | AT4G11980 | 129 | pre-tRNA/non-coding RNA | nudix hydrolase homolog 14 | nucleus/cytosol | plastid | ||
AT4G16160 | AT4G16155 | 205 | y | OEP16-S | dihydrolipoyl dehydrogenase | plastid | plastid | |
AT4G17560 | AT4G17550 | 541 | y | Ribosomal protein L19 family | glycerol-3-phosphate permease gene family | plastid | mitochondrion | |
AT4G17730 | AT4G17720 | 440 | syntaxin23 | RNA-binding (RRM/RBD/RNP motifs) family | cytosol | cytosol | ||
AT4G18240 | AT4G18230 | 169 | starch synthase 4 (SS4) | unknown protein | plastid | plasma membrane | ||
AT4G18370 | AT4G18360 | 447 | DEG5 - photosystem II repair | Aldolase-type TIM barrel family | plastid | peroxisome | ||
AT4G19020 | AT4G19010 | 277 | chromomethylase 2 (CMT2) | AMP-dependent synthetase and ligase family | nucleus | peroxisome | ||
AT4G21280 | AT4G21270 | 267 | PsbQ subunit photosystem II | kinesin-like motor protein | plastid | nucleus | ||
AT4G23840 | AT4G23820 | 254 | Leucine-rich repeat (LRR) family | Pectin lyase-like superfamily | cytosol | extracellular | ||
AT4G25140 | AT4G25130 | 366 | Oleosin1 | chloroplast methionine sulfoxide reductase | lipid body | plastid | ||
AT4G25580 | AT4G25570 | 561 | cold acclimation protein (CAP160) | cytochrome b561 | nucleus | plasma membrane | ||
AT4G31080 | AT4G31070 | 351 | unknown function (DUF2296) | Tetratricopeptide repeat (TPR)-like | ER | cytosol | ||
AT4G33540 | AT4G33530 | 365 | metallo-beta-lactamase family | K + UPTAKE PERMEASE 5 (KUP5) | plastid | plasma membrane | ||
AT5G05490 | AT5G05480 | 293 | SYN1 (RAD21-like) gene | Peptide-N4-asparagine amidase A protein | nucleus | plasma membrane | ||
AT5G05987 | AT5G05980 | 509 | y | prenylated RAB acceptor 1.A2 | folylpolyglutamate synthetase isoform | membrane | mitochondrion | |
AT5G07320 | AT5G07315 | 363 | Mito ATP-Mg/Pi transporter | pre-tRNA/non-coding RNA | mitochondrion | nucleus/cytosol | ||
AT5G10080 | AT5G10070 | 409 | Eukaryotic aspartyl protease | RNase L inhibitor protein-related | membrane | cytosol | ||
AT5G10745 | AT5G10740 | 275 | unknown protein | Protein phosphatase 2C family protein | membrane | nucleus | ||
AT5G16760 | AT5G16750 | 331 | inositol-trisphosphate 5/6-kinase | TORMOZEMBRYO DEFECTIVE (TOZ) | cytosol | nucleolus | ||
AT5G37350 | AT5G37340 | 232 | RIO1 kinase | ZPR1 zinc-finger domain protein | nucleus | cytosol | ||
AT5G51540 | AT5G51530 | 529 | Zincin-like metalloproteases | Ubiquitin c-terminal hydrolase | plastid | cytosol | ||
AT5G54062 | AT5G54060 | 424 | unknown protein | anthocyanin 3-O-glucoside | extracellular | membrane | ||
AT5G54970 | AT5G54960 | 449 | unknown protein | pyruvate decarboxylase-2 | cytosol | cytosol | ||
AT5G61940 | AT5G61930 | 481 | y | Ubiquitin c-terminal hydrolase | ACCUMULATION OF PHOTOSYSTEM ONE 3 | nucleus | mitochondrion | |
AT5G62490 | AT5G62480 | 537 | AtHVA22 family | glutathione transferase | extracellular | cytosol | ||
AT5G64220 | AT5G64210 | 582 | Calmodulin-binding activator | isoform of alternative oxidase | nucleus | mitochondrion | ||
AT5G67230 | AT5G67220 | 514 | GT43 glycosyltransferase family | FMN-linked oxidoreductase superfamily | mitochondrion | mitochondrion |