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Table 2 Motif sequences of 56 BcWRKY proteins identified by MEME tools

From: Characterization and co-expression analysis of WRKY orthologs involved in responses to multiple abiotic stresses in Pak-choi (Brassica campestris ssp. chinensis)

Motif

Consensus sequence

Known motif description

Motif1

LDDGYRWRKYGQKPVKGSPYPRSYYRCTT

WRKY

Motif2

CPVRKQVERSAEDPSIVITTY

 

Motif3

NDGYQWRKYGQKVAKGNPCPRAYYRCTMA

WRKY

Motif4

EGKHNHPLPxARxSxASSTSA

 

Motif5

KKSEKKVREPRVAVQTRSDVD

Nuclear location signal

Motif6

LREELNRVNEENKKLKEMLSQVxENYNSLQMHLEKLMRQQ

 

Motif7

MQEVLVEQMASALTADPNFTAALAAAISSIIGGQNNT

 

Motif8

KFTQGCKATKQVQKIENDPSLFRITYIGKHTCNV

 
  1. Significant motifs (e-value < 1e-100) of more than 10 amino acid length were predicted by MEME search.