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Table 1 List of genes associated with various abiotic stresses and disease resistance used in the study

From: A high-throughput virus-induced gene silencing protocol identifies genes involved in multi-stress tolerance

 

Gene

Functional annotation of gene fragments

NCBI GenBank accession #

Reference*

Salinity tolerance

1

NbSOS1

Salt overly sensitive 1 (Na+/H + antiporter)

JK739016

[35]

Oxidative stress tolerance

2

NbAPX3

Ascorbate peroxidase 3

JK739005

[36]

3

NbGST1

Glutathione S-transferase 1

JK739012

[37, 38]

4

NbCAT3

Catalase isozyme 3

JK739008

[39]

5

NbDHAR1

Dehydroascorbate reductase 1

JK739010

[40]

6

NbGPX2

Glutathione peroxidase 2

JK739011

[38, 41]

7

NbFER2

Ferritin 2

JK739023

[42]

High or low temperature stress tolerance

8

NbHSP101

101 kDa heat shock protein

JK739013

[43]

9

NbBIP5

Binding protein 5

JK739006

[44]

Water deficit stress tolerance

10

NbP5CS1

Delta-1-pyrroline-5-carboxylate synthetase 1

JK739014

[45]

11

NbCBL1

Calcineurin B-like protein 1

JK739022

[46, 47]

12

NbMYC2

MYC-related transcription factor 2

JK739021

[48]

13

NbGBP16

Putative monomeric G-protein 16

JK739018

[49]

14

NbRBX1

Ring box 1 like protein

JK739020

[50]

Disease resistance

15

NbPAL1

Phenylalanine ammonia-lyase 1

JK739025

[51]

16

NtEDS1

Enhanced disease susceptibility 1

AF480489

[52]

17

NtNPR1

Non-expresser of pathogenesis related gene 1

AF480488

[53]

18

NtRAR1

Required for Mla12 resistance 1

AF480487

[54]

19

NbADR1

Activated disease resistance 1

JK739004

[55]

Other genes up- or down-regulated by various stresses

20

NbMC

Metacaspase type II

JK739007

[56]

21

NbCYCD2

Cyclin D2.1 protein

JK739009

-

22

NbCTR1

Constitutive triple response 1-like protein kinase

JK739017

[57]

23

NbWRKY1

WRKY DNA-binding protein 1

AY547498

[57]

24

NtMEK1

MAP kinase/ERK kinase 1

AJ302651

[57]

25

NbWRKY2

WRKY DNA-binding protein 2

AY547495

[57]

26

NbETR1

Ethylene response 1

EF203416

[58]

27

NbFLS1

Flavonol synthase 1

JK739019

[59]

28

NbMYB1

MYB-related transcription factor 1

JK739024

[57]

  1. *citations are given to indicate the gene function and not silencing of respective gene by VIGS.