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Table 6 Linkage disequilibrium between markers of crtRB1 and lcyE within the 130 yellow maize inbred lines

From: Marker-trait association analysis of functional gene markers for provitamin A levels across diverse tropical yellow maize inbred lines

R2*

lcyE 5′TE

lcyE SNP (216)

lcyE 3′indel

crtRB1 5′TE

crtRB1 indel4

crtRB1 3′TE

lcyE 5′TE

 

7.29E-11

7.68E-13

1.09E-03

3.11E-01

8.50E-03

lcyE SNP (216)

0.3810

 

3.92E-07

1.43E-05

5.66E-01

1.82E-04

lcyE 3′indel

0.3990

0.2050

 

1.53E-01

1.13E-01

1.01E-01

crtRB1 5′TE

0.1010

0.1880

0.0201

 

1.55E-01

7.88E-19

crtRB1 indel4

0.0115

0.0041

0.0208

0.0166

 

2.48E-01

crtRB1 3′TE

0.0658

0.1350

0.0262

0.7570

0.0144

 
  1. *Upper triangle contains p-value and lower triangle contains R2.