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Table 5 PPR protein a and sigma factor b distribution

From: Comparative analyses of two Geraniaceae transcriptomes using next-generation sequencing

 

Arabidopsis thaliana

Geranium maderense

Pelargoniumx hortorum

PPR proteins

429

523

315

P class

238

387

262

PLS-E class

105

96

22

PLS-DYW class

86

40

31

Sigma factors

6

10

6

Sig 1

1

1

1

Sig 2

1

4

1

Sig 3

1

1

1

Sig 4

1

1

1

Sig 5

1

3

1

Sig 6

1

1

1

  1. aPPR protein data of Arabidopsis are from Small and Peeters [92]. The PPR class represents the number contigs longer than 150 aa, which is the minimum length of PPR proteins identified in Arabidopsis. bThe number of total contigs and the number of intact contigs aligned to the reference sigma factors are shown. Intact contigs are those with start/stop codons on 5′ and 3′ ends, and without any internal stop codons.
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BMC Plant Biology

ISSN: 1471-2229

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