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Table 1 Expansin and other selected plant gene family compositions

From: Selaginella moellendorffiihas a reduced and highly conserved expansin superfamily with genes more closely related to angiosperms than to bryophytes

 

Arabidopsis thaliana

Oryza sativa

Populus trichocarpa

Selaginella moellendorffii

Physcomitrella patens

EXPA

26

33

27

15

28

EXPB

6

18

3

2

7

EXLA

3

4

2

0

0

EXLB

1

1

4

0

0

MIP

35

33

55

19

23

XTH

33

30

41

19

31

Callose synthase

12

10

19

7

12

sequence available

complete genome

complete genome

473.1 Mbp†

212.5 Mbp

480 MbpΔ

 

22, 136 scaffolds

759 scaffolds

2,106 scaffolds

7.5X coverage

7.0X coverage

8.1X coverage

  1. Numbers and type of genes found in a sampling of plant species with completed or nearly completed genome sequences [17, 18, 25–28].
  2. † at time of search (Sampedro, Carey, & Cosgrove, 2006).
  3. Δ at time of search (Carey & Cosgrove, 2007).