Skip to main content
Figure 7 | BMC Plant Biology

Figure 7

From: Promzea: a pipeline for discovery of co-regulatory motifs in maize and other plant species and its application to the anthocyanin and phlobaphene biosynthetic pathways and the Maize Development Atlas

Figure 7

Example of the Promzea output for anthocyanin pathway Motif3. For each predicted motif, the following outputs are displayed: (A) the sequence logo (upper) and the plain consensus sequence (lower); (B) the frequency of occurrence of the motif at each upstream position range from the user input data set; (C) summary of annotations of genes containing the motif from the genome-wide retrieval (when applicable). A user can click on the Gene List link and Over-Represented Annotation link to retrieve lists of genes containing the motif and detailed gene annotations, respectively.

Back to article page

BMC Plant Biology

ISSN: 1471-2229

Contact us