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Table 2 agp6 agp11 differentially expressed genes among the MapMan BINs [29.5.11.4.3.2: protein. degradation. ubiquitin. E3. SCF. F-box], [30.2: signaling.receptor kinases], [30.3: signaling.calcium], [20.1:stress.biotic], and [20.2.1: stress.abiotic.heat]

From: Expression-based and co-localization detection of arabinogalactan protein 6 and arabinogalactan protein 11 interactors in Arabidopsis pollen and pollen tubes

MapMan BIN

AGI locus

LBFCa

Gene annotationb

29.5.11.4.3.2: protein. degradation. ubiquitin. E3. SCF. F-box

Up-regulated

 

At1g65760

11.8

Protein of unknown function (DUF295)

 

At2g27520

6.63

F-box and associated interaction domains-containing protein

 

At5g38390

5.43

F-box/RNI-like superfamily protein

 

At3g52030

3.92

F-box family protein with WD40/YVTN repeat domain

 

At2g24080

3.52

Protein of unknown function (DUF295)

 

At5g27750

3.19

F-box/FBD-like domains containing protein

 

At3g49520

2.79

F-box and associated interaction domains-containing protein

 

At1g70360

2.65

F-box family protein

 

At3g17710

2.40

F-box and associated interaction domains-containing protein

 

At2g17020

2.25

F-box/RNI-like superfamily protein

 

At3g13820

2.08

F-box and associated interaction domains-containing protein

 

At2g03580

1.99

F-box family protein-related

 

At5g03000

1.75

Galactose oxidase/kelch repeat superfamily protein

 

At1g06630

1.71

F-box/RNI-like superfamily protein

 

At3g50080

1.61

VFB2, VIER F-box proteine 2

 

At5g60610

1.55

F-box/RNI-like superfamily protein

 

At3g18980

1.50

EIN2 targeting protein1 (ETP1)

 

At3g59000

1.44

F-box/RNI-like superfamily protein

 

At2g07120

1.38

F-box associated ubiquitination effector family protein

 

At5g49610

1.36

F-box family protein

 

At1g55590

1.35

RNI-like superfamily protein

 

At1g23780

1.34

F-box family protein

Down-regulated

 

At5g43190

−7.32

Galactose oxidase/kelch repeat superfamily protein

 

At1g68050

−4.00

“Flavin-binding, kelch repeat, F-box 1”

 

At1g12490

−3.55

F-box associated ubiquitination effector family protein

 

At1g55000

−1.99

Peptidoglycan-binding LysM domain-containing protein

 

At1g78840

−1.96

F-box/RNI-like/FBD-like domains-containing protein

 

At2g25490

−1.58

EIN3-binding F-box protein 1

 

At4g04690

−1.52

F-box and associated interaction domains-containing protein

 

At1g70590

−1.44

F-box family protein

30.2: signaling. receptor kinases

Up-regulated

 

At4g23280

2.27

Cysteine-rich RLK (RECEPTOR-like protein kinase) 20

 

At3g21970

2.22

Domain of unknown function (DUF26)

 

At5g40380

1.33

Cysteine-rich RLK (RECEPTOR-like protein kinase) 42

 

At4g20790

1.76

Leucine-rich repeat protein kinase family protein

 

At3g24550

1.61

Proline extensin-like receptor kinase 1

 

At4g28670

1.41

Protein kinase family protein with domain of unknown function (DUF26)

 

At5g23170

1.35

Protein kinase superfamily protein

Down-regulated

 

At4g20530

−7.70

Receptor-like protein kinase-related

 

At5g59650

−3.61

Leucine-rich repeat protein kinase family protein

 

At4g02420

−2.87

Concanavalin A-like lectin protein kinase family protein

 

At1g11280

−2.01

S-locus lectin protein kinase family protein

 

At1g61380

−1.73

S-domain-1 29

30.3: signaling. calcium

Up-regulated

 

At1g18890

2.66

Calcium-dependent protein kinase 1

 

At5g19360

2.30

Calcium-dependent protein kinase 34

 

At5g62390

1.57

BCL-2-associated athanogene 7

 

At4g20780

1.48

Calmodulin-like 42 Calcium; sensor involved in trichome branching

 

At1g05150

1.44

Calcium-binding tetratricopeptide family protein

 

At5g42380

1.40

Calmodulin-like 37

 

At1g51960

1.38

IQ-domain 27

 

At5g47100

1.31

Calcineurin B-like protein 9

Down-regulated

 

At1g18530

−1.89

EF hand calcium-binding protein family

 

At5g55990

−1.88

Calcineurin B-like protein 2

 

At2g33990

−1.68

IQ-domain 9

 

At1g62480

−1.54

Vacuolar calcium-binding protein-related

 

At2g41410

−1.48

Calcium-binding EF-hand family protein

 

At4g34150

−1.33

Calcium-dependent lipid-binding (CaLB domain) family protein

20.1: stress. biotic

Up-regulated

 

At2g19970

23.34

CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein

 

At3g02840

2.56

ARM repeat superfamily protein

 

At4g16920

2.52

Disease resistance protein (TIR-NBS-LRR class) family

 

At1g32210

1.78

Defender against death (DAD family) protein

 

At2g35520

1.77

Defender against death (DAD family) protein

Down-regulated

 

At4g09950

−25.77

P-loop containing nucleoside triphosphate hydrolases superfamily protein

 

At3g44400

−6.01

Disease resistance protein (TIR-NBS-LRR class) family

 

At4g16860

−4.48

Disease resistance protein (TIR-NBS-LRR class) family

 

At1g75040

−2.63

Pathogenesis-related gene 5

 

At3g18690

−1.88

MAP kinase substrate 1

 

At1g14530

−1.82

TOM THREE HOMOLOG 1 (THH1); Protein of unknown function DUF1084

 

At1g58170

−1.59

Disease resistance-responsive (dirigent-like protein) family protein

 

At2g25240

−1.41

Serine protease inhibitor (SERPIN) family protein

20.2.1: stress. abiotic. heat

Up-regulated

 

At1g28210

2.40

DNAJ heat shock family protein

 

At3g22530

1.97

Unknown protein

 

At1g72070

1.50

Chaperone DnaJ-domain superfamily protein

Down-regulated

 

At2g29500

−4.93

HSP20-like chaperones superfamily protein

 

At3g46230

−1.92

Heat shock protein 17.4

 

At5g12030

−1.84

Heat shock protein 17.6A

 

At1g79920

−1.84

Heat shock protein 70 (Hsp 70) family protein

 

At1g59860

−1.78

HSP20-like chaperones superfamily protein

 

At5g22060

−1.65

DNAJ homologue 2

 

At1g71000

−1.49

Chaperone DnaJ-domain superfamily protein

 

At2g03020

−1.49

Heat shock protein HSP20/alpha crystallin family

 

At4g13830

−1.43

DNAJ-like 20

 

At5g02500

−1.41

Heat shock cognate protein 70-1

 

At1g53540

−1.34

HSP20-like chaperones superfamily protein

  1. aagp6 agp11 to wild type lower bound of fold change.
  2. b TAIR annotations [14].