Table 2 Characterization of up- (>5-fold) or downregulated (<0.2-fold) transcripts annotated by RAP-DB under ER stress condition
| Â | Gene | Description | FPKM | Fold change | FDR | |
|---|---|---|---|---|---|---|
DMSO | TM | |||||
> 5 | Os05g0428600 | OsBiP4 | 1.10 | 94.81 | 86.36 | 0 |
Os05g0367800 | OsBiP3 | 1.00 | 28.81 | 28.81 | 8.51224E-40 | |
Os09g0512700 | Fes1-like | 14.51 | 347.38 | 23.94 | 0 | |
Os03g0710500 | OsBiP2 | 1.03 | 16.95 | 16.45 | 0.000805324 | |
Os03g0832200 | Calreticulin | 12.20 | 162.11 | 13.29 | 0 | |
Os05g0591400 | HSP70 | 1.08 | 12.33 | 11.36 | 0.000529672 | |
Os07g0593400 | Golgi transport 1 protein B | 2.95 | 33.29 | 11.30 | 3.71682E-06 | |
Os03g0293000 | DnaJ domain containing protein | 15.75 | 167.48 | 10.63 | 0 | |
Os08g0156100 | Conserved hypothetical protein | 4.91 | 43.59 | 8.89 | 7.11559E-08 | |
Os06g0622700 | OsbZIP50 | 27.89 | 237.66 | 8.52 | 0 | |
Os06g0593100 | UDP-galactose/UDP-glucose transporter | 46.56 | 343.21 | 7.37 | 0 | |
Os04g0670500 | Cysteine protease 1 precursor | 1.17 | 8.60 | 7.33 | 2.30013E-05 | |
Os09g0451500 | OsPDIL2-3 | 81.99 | 562.22 | 6.86 | 0 | |
Os06g0697500 | ATPase | 1.82 | 12.27 | 6.74 | 1.02548E-06 | |
Os02g0584700 | Heavy metal transport/detoxification protein | 4.79 | 28.97 | 6.04 | 5.35941E-05 | |
Os08g0156000 | Conserved hypothetical protein | 29.55 | 175.40 | 5.94 | 0 | |
Os05g0187800 | Similar to Derlin-1 | 51.68 | 297.54 | 5.76 | 0 | |
Os06g0212900 | HSP70 | 1.46 | 8.28 | 5.68 | 3.75258E-05 | |
Os03g0733800 | Ero1 | 18.07 | 101.20 | 5.60 | 0 | |
Os01g0517900 | HSP70 | 1.00 | 5.48 | 5.48 | 1.41916E-10 | |
Os01g0517850 | Luminal-binding protein | 1.00 | 5.48 | 5.48 | 1.41916E-10 | |
Os01g0280500 | Eukaryotic translation initiation factor 6 | 3.30 | 17.99 | 5.45 | 1.62648E-05 | |
Os03g0820300 | ZPT2-14 | 6.31 | 34.12 | 5.41 | 1.17726E-06 | |
Os07g0661100 | Glycosyl transferase | 24.66 | 130.99 | 5.31 | 0 | |
Os01g0510200 | Conserved hypothetical protein | 33.02 | 169.75 | 5.14 | 4.85665E-12 | |
Os02g0115900 | BiP1 | 138.93 | 710.22 | 5.11 | 0 | |
Os08g0278900 | SDF2-like | 29.90 | 151.76 | 5.08 | 9.33971E-12 | |
Os02g0115950 | Glutamate dehydrogenase | 127.05 | 644.35 | 5.07 | 9.40366E-07 | |
Os07g0605800 | STF-1 | 7.44 | 37.60 | 5.05 | 9.14091E-10 | |
< 0.2 | Os11g0539200 | Xyloglucan endotransglycosylase XET2 | 49.84 | 6.74 | 0.135 | 0 |
Os07g0432333 | Thionin-like peptide | 24.74 | 3.89 | 0.157 | 2.98571E-06 | |
Os02g0268050 | Expansin-A23 | 6.07 | 1.00 | 0.165 | 0.0369366 | |