A combined linkage and regional association mapping validation and fine mapping of two major pleiotropic QTLs for seed weight and silique length in rapeseed (Brassica napus L.)

Table 5 Association and conditional analysis for seed weight and silique length

Marker	Linkage group	Positions (Mb)	p value/R²(%)
			SW	SWSL1^a	SWSL2^b	SL	SLSW1	SLSW2
BrSF6-1390	A09	29.02				7.7E-03/5.5
BrSF6-1511	A09	29.25	2.0E-03/4.3
BrSF6-1572	A09	29.36	1.2E-06/7.2			2.2E-13/13.8	2.5E-06/7.0
BrSF6-1595	A09	29.4	8.2E-04/4.2					2.2E-07/6.8
BrSF6-2245	A09	30.6						1.6E-04/6.1
BrSF6-1964	A09	30.12	7.7E-06/8.6			3.3E-10/14.9	1.0E-03/6.2
BrSF6-2025	A09	30.23				3.3E-06/8.8	2.9E-04/7	1.6E-04/6.1
BrSF0358	A09	30.28				4.2E-03/3.9
BrSF6-2387	A09	30.82	1.4E-03/7.2			2.3E-08/12.8	5.0E-05/9.4
BrSF6-2389	A09	30.82						1.2E-05/8.6
BrSF0250a	A09	30.85				5.3E-03/2.7
BrGMS0025	A09	31.03	5.7E-13/14.6	5.5E-03/3.2	1.8E-06/6.3	8.4E-18/18.8	1.1E-07/8.5	4.6E-10/9.5

x|y1^a: Indicates that trait x is conditioned by trait y using the first conditional analysis method.
x|y2^b: Indicates that trait x is conditioned by trait y using the second conditional analysis method.

ISSN: 1471-2229