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Table 2 Summary of sRNAs from control and B-deficient roots of Citrus sinensis

From: Identification of boron-deficiency-responsive microRNAs in Citrus sinensis roots by Illumina sequencing

 

Controls

B-deficiency

Unique sRNAs

Total sRNAs

Unique sRNAs

Total sRNAs

Raw reads

 

22998100

 

22576217

Clear reads

4505507 (100%)

21668361 (100%)

4704810 (100%)

21530509 (100%)

Mapped to genomic

2343700 (52.02%)

16586059 (76.55%)

2669645 (56.74%)

16889709 (78.45%)

Exon antisense

91162 (2.02%)

310775 (1.43%)

105747 (2.25%)

361376 (1.68%)

Exon sense

236699 (5.25%)

586775 (2.71%)

233380 (4.96%)

605450 (2.81%)

Intron antisense

50614 (1.12%)

185709 (0.86%)

60167 (1.28%)

201017 (0.93%)

Intron sense

92377 (2.05%)

577538 (2.67%)

107307 (2.28%)

691496 (3.21%)

miRNA

51603 (1.15%)

5003869 (23.09%)

41144 (0.87%)

5618205 (26.09%)

rRNA

168606 (3.74%)

3864145 (17.83%)

101906 (2.17%)

2525627 (11.73%)

snRNA

4057 (0.09%)

17352 (0.08%)

3651 (0.08%)

16305 (0.08%)

snoRNA

1630 (0.04%)

4804 (0.02%)

1952 (0.04%)

6788 (0.03%)

tRNA

32162 (0.71%)

1005187 (4.64%)

19256 (0.41%)

749792 (3.48%)

Unannotated sRNAs

3776597 (83.82%)

10112207 (46.67%)

4030300 (85.66%)

10754453 (49.95%)