Genome-wide association for grain morphology in synthetic hexaploid wheats using digital imaging analysis

BMC Plant Biology

Table 5 Co-localization of traits associated DArT markers on D-genome with Ae. tauschii draft genome sequence data (Jia et al. 2013) [45]

DArT	Trait associated	Chr	Pos	*Ae. tauschii*draft genome sequence accessed 2013/10/26
DArT	Trait associated	Chr	Pos	Scaffold	E-value	GO
wPt-2644	HPC1	2D	70.93	46122	0	P-loop containing nucleoside triphosphate hydrolase
wPt-1301	FFD	2D	103.56	12384	7E-214	Topoisomerase DNA binding C4 zinc finger
wPt-6343	FFD	2D	103.56	12384		Topoisomerase DNA binding C4 zinc finger
wPt-8319	HArea	2D	104.27	59412	3E-12	UCP
wPt-1615	VPerim	2D	112.64	15328	3E-94	UCP
wPt-2858	VPerim	2D	112.64	115328	8E-42	UCP
wPt-8463	HPC4	3D	53.86	60730	2E-12	Transmembrane helicase
wPt-0485	Thickness	3D	160.16	73711	5E-180	Putative cysteine-rich receptor-like protein kinase 39
wPt-2923	Weight, Thickness, Vol, Varea, Width	3D	160.16	73711	5E-180	Putative cysteine-rich receptor-like protein kinase 39
wPt-8164	Weight, Thickness, Vol, Varea, Width	3D	166.43	73711	2E-134	Wall-associated receptor kinase 5
wPt-2565	FFD	7D	1.37	126470	0	Disease resistance protein RPP13
wPt-1100	Vround	7D	37.25	19484	6E-174	UCP

ISSN: 1471-2229