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Table 2 Quantitative trait loci identified in the doubled haploid population for the ovicidal response

From: Quantitative trait loci identification, fine mapping and gene expression profiling for ovicidal response to whitebacked planthopper (Sogatella furcifera Horvath) in rice (Oryza sativa L.)

Traits

QTL*

Chromosome

Interval

LOD

Variance explained (%)

Additive effect

2006

WL

qWL1.1(1)

1

RM575-RM259

2.72

6.79

0.53

 

qWL1.2(1)

1

RM1198-RM104

3.31

13.78

-0.74

 

qWL2(1)

2

RM521-RM324

3.09

15.61

-0.84

 

qWL6

6

RM6176-RM539

12.23

30.23

-1.67

 

qWL7(1)

7

RM1279-RM505

2.81

8.51

-0.67

 

qWL10(1)

10

RM5271-RM216

2.65

6.72

0.55

EM

qEM2(1)

2

RM324-RM341

3.01

16.74

-18.54

 

qEM3(1)

3

RM282-RM6266

2.63

12.15

15.55

 

qEM6(1)

6

RM6176-RM539

4.33

25.74

-31.45

 

qEM7(1)

7

RM505-RM234

3.09

15.30

-17.83

2007

WL

qWL2(2)

2

RM341-RM263

2.94

14.55

-0.78

 

qWL4(2)

4

RM401-RM6997

2.47

9.13

0.78

 

qWL5(2)

5

RM6972-RM3170

3.46

12.09

-0.8

 

qWL6

6

RM6176-RM539

12.14

34.24

-1.73

EM

qEM2(2)

2

RM341-RM263

2.86

13.84

-19.85

 

qEM4(2)

4

RM401-RM6997

2.31

9.06

14.03

 

qEM5(2)

5

RM5642-RM6972

2.63

10.12

-16.05

 

qEM6(2)

6

RM8200-RM6176

4.15

24.10

-34.88

 

qEM10(2)

10

RM216-RM467

2.46

8.42

11.00

  1. *The numbers “1” and “2” in brackets indicate the quantitative trait loci identified in 2006 and 2007, respectively.