Table 1 General dataset description
From: Impact of recurrent gene duplication on adaptation of plant genomes
| Â | UP1 | UP2 | UPps | SO1 | SO2 |
|---|---|---|---|---|---|
Clusters for final codeml site model analysis | 160 | 1,512 | 90 | 167 | 1,203 |
Clusters for final mapNH analysis | 154 | 1,435 | 90 | 167 | 1,203 |
Total number of branches | 1,881 | 22,475 | 1,730 | 1,817 | 13,537 |
Number of analysed branches by mapNH | 1,257 | 14,326 | 1,298 | 1,807 | 13,374 |
Median cluster size (1st Qu; 3rd Qu) | 7 (6; 8) | 7 (6; 10) | 8 (6; 13) | 7 (6; 8) | 7 (6; 8) |
Median alignment length (1st Qu; 3rd Qu) [bp] | 1,272 (792; 1,858) | 1,220 (753; 1,851) | 1,314 (864; 1,942) | 1,230 (900; 1,737) | 987 (651; 1,470) |
Total number of branches | 1,881 | 22,475 | 1,730 | 1,817 | 13,537 |
Total number of sites | 42,706 | 355,486 | 21,864 | 59,191 | 340,556 |