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Table 4 Transcription factors

From: The American cranberry: first insights into the whole genome of a species adapted to bog habitat

TF_family

Cranberry

Apple

Arabidopsis

Grape

Rice

MYB

119

428

263

275

252

bHLH

79

244

172

116

196

AP2-EREBP

74

274

166

145

188

C3H

70

148

83

54

109

C2H2

68

313

107

129

124

Orphans

53

136

86

140

216

PHD

52

127

55

70

61

HB

51

169

105

75

137

NAC

41

261

120

81

146

bZIP

37

107

110

50

127

SNF2

33

64

43

35

48

WRKY

32

145

85

64

119

GNAT

29

n.d.

41

32

45

SET

29

68

46

45

34

mTERF

26

n.d.

36

21

29

CCAAT

25

193

72

87

69

GRAS

25

121

36

51

63

Trihelix

23

27

27

62

26

TRAF

22

n.d.

29

19

90

ABI3VP1

21

80

59

36

60

G2-like

20

19

53

35

57

C2C2-Dof

19

58

44

24

36

FAR1

19

n.d.

24

42

129

LOB

19

n.d.

49

45

43

FHA

17

34

19

13

22

MADS

17

152

124

65

87

C2C2-GATA

16

39

37

24

37

AUX/IAA

15

52

35

24

52

TCP

15

58

30

18

25

SBP

14

42

28

19

29

ARF

12

37

35

19

49

HSF

12

56

24

20

40

OFP

12

n.d.

18

11

30

BSD

10

n.d.

12

7

8

HMG

9

23

21

12

20

RWP-RK

9

14

16

7

14

Jumonji

8

29

20

19

17

SWI/SNF-BAF60b

8

n.d.

17

14

10

Transcription Factors

ARID

7

n.d.

11

10

6

ARR-B

7

16

17

29

12

C2C2-CO-like

7

17

21

6

24

Sigma70-like

7

n.d.

6

6

7

Tify

7

n.d.

26

11

16

BES1

6

24

14

9

6

E2F-DP

6

15

14

7

12

TAZ

6

n.d.

8

3

2

TUB

6

21

15

11

26

CAMTA

5

n.d.

9

4

7

GeBP

5

13

20

3

6

SWI/SNF-SWI3

5

n.d.

5

5

4

zf-HD

5

29

18

17

15

BBR/BPC

4

6

16

3

9

DDT

4

n.d.

5

6

6

GRF

4

n.d.

9

7

13

HRT

4

n.d.

2

1

1

LUG

4

n.d.

7

3

7

Pseudo

4

n.d.

5

5

4

CSD

3

n.d.

4

3

4

Alfin-like

2

n.d.

9

6

9

Coactivator

2

n.d.

7

2

2

CPP

2

n.d.

9

6

11

DBP

2

n.d.

5

4

6

LIM

2

n.d.

10

5

6

PBF-2-like

2

n.d.

4

2

2

PLATZ

2

n.d.

14

9

15

SRS

2

8

13

6

6

C2C2-YABBY

1

n.d.

8

7

7

EIL

1

n.d.

6

4

8

IWS1

1

n.d.

2

1

1

LFY

1

n.d.

1

1

2

MBF1

1

n.d.

3

3

4

MED6

1

n.d.

1

1

1

RB

1

n.d.

1

2

2

Rcd1-like

1

n.d.

3

2

6

SAP

1

n.d.

1

1

0

SOH1

1

n.d.

1

0

2

TIG

1

n.d.

0

0

0

ULT

1

n.d.

2

1

2

VOZ

1

n.d.

3

2

2

ZIM

0

0

23

0

23

  1. The numbers found in cranberry for each family as compared to other selected species.