From: The American cranberry: first insights into the whole genome of a species adapted to bog habitat
TF_family | Cranberry | Apple | Arabidopsis | Grape | Rice |
---|---|---|---|---|---|
MYB | 119 | 428 | 263 | 275 | 252 |
bHLH | 79 | 244 | 172 | 116 | 196 |
AP2-EREBP | 74 | 274 | 166 | 145 | 188 |
C3H | 70 | 148 | 83 | 54 | 109 |
C2H2 | 68 | 313 | 107 | 129 | 124 |
Orphans | 53 | 136 | 86 | 140 | 216 |
PHD | 52 | 127 | 55 | 70 | 61 |
HB | 51 | 169 | 105 | 75 | 137 |
NAC | 41 | 261 | 120 | 81 | 146 |
bZIP | 37 | 107 | 110 | 50 | 127 |
SNF2 | 33 | 64 | 43 | 35 | 48 |
WRKY | 32 | 145 | 85 | 64 | 119 |
GNAT | 29 | n.d. | 41 | 32 | 45 |
SET | 29 | 68 | 46 | 45 | 34 |
mTERF | 26 | n.d. | 36 | 21 | 29 |
CCAAT | 25 | 193 | 72 | 87 | 69 |
GRAS | 25 | 121 | 36 | 51 | 63 |
Trihelix | 23 | 27 | 27 | 62 | 26 |
TRAF | 22 | n.d. | 29 | 19 | 90 |
ABI3VP1 | 21 | 80 | 59 | 36 | 60 |
G2-like | 20 | 19 | 53 | 35 | 57 |
C2C2-Dof | 19 | 58 | 44 | 24 | 36 |
FAR1 | 19 | n.d. | 24 | 42 | 129 |
LOB | 19 | n.d. | 49 | 45 | 43 |
FHA | 17 | 34 | 19 | 13 | 22 |
MADS | 17 | 152 | 124 | 65 | 87 |
C2C2-GATA | 16 | 39 | 37 | 24 | 37 |
AUX/IAA | 15 | 52 | 35 | 24 | 52 |
TCP | 15 | 58 | 30 | 18 | 25 |
SBP | 14 | 42 | 28 | 19 | 29 |
ARF | 12 | 37 | 35 | 19 | 49 |
HSF | 12 | 56 | 24 | 20 | 40 |
OFP | 12 | n.d. | 18 | 11 | 30 |
BSD | 10 | n.d. | 12 | 7 | 8 |
HMG | 9 | 23 | 21 | 12 | 20 |
RWP-RK | 9 | 14 | 16 | 7 | 14 |
Jumonji | 8 | 29 | 20 | 19 | 17 |
SWI/SNF-BAF60b | 8 | n.d. | 17 | 14 | 10 |
Transcription Factors | |||||
ARID | 7 | n.d. | 11 | 10 | 6 |
ARR-B | 7 | 16 | 17 | 29 | 12 |
C2C2-CO-like | 7 | 17 | 21 | 6 | 24 |
Sigma70-like | 7 | n.d. | 6 | 6 | 7 |
Tify | 7 | n.d. | 26 | 11 | 16 |
BES1 | 6 | 24 | 14 | 9 | 6 |
E2F-DP | 6 | 15 | 14 | 7 | 12 |
TAZ | 6 | n.d. | 8 | 3 | 2 |
TUB | 6 | 21 | 15 | 11 | 26 |
CAMTA | 5 | n.d. | 9 | 4 | 7 |
GeBP | 5 | 13 | 20 | 3 | 6 |
SWI/SNF-SWI3 | 5 | n.d. | 5 | 5 | 4 |
zf-HD | 5 | 29 | 18 | 17 | 15 |
BBR/BPC | 4 | 6 | 16 | 3 | 9 |
DDT | 4 | n.d. | 5 | 6 | 6 |
GRF | 4 | n.d. | 9 | 7 | 13 |
HRT | 4 | n.d. | 2 | 1 | 1 |
LUG | 4 | n.d. | 7 | 3 | 7 |
Pseudo | 4 | n.d. | 5 | 5 | 4 |
CSD | 3 | n.d. | 4 | 3 | 4 |
Alfin-like | 2 | n.d. | 9 | 6 | 9 |
Coactivator | 2 | n.d. | 7 | 2 | 2 |
CPP | 2 | n.d. | 9 | 6 | 11 |
DBP | 2 | n.d. | 5 | 4 | 6 |
LIM | 2 | n.d. | 10 | 5 | 6 |
PBF-2-like | 2 | n.d. | 4 | 2 | 2 |
PLATZ | 2 | n.d. | 14 | 9 | 15 |
SRS | 2 | 8 | 13 | 6 | 6 |
C2C2-YABBY | 1 | n.d. | 8 | 7 | 7 |
EIL | 1 | n.d. | 6 | 4 | 8 |
IWS1 | 1 | n.d. | 2 | 1 | 1 |
LFY | 1 | n.d. | 1 | 1 | 2 |
MBF1 | 1 | n.d. | 3 | 3 | 4 |
MED6 | 1 | n.d. | 1 | 1 | 1 |
RB | 1 | n.d. | 1 | 2 | 2 |
Rcd1-like | 1 | n.d. | 3 | 2 | 6 |
SAP | 1 | n.d. | 1 | 1 | 0 |
SOH1 | 1 | n.d. | 1 | 0 | 2 |
TIG | 1 | n.d. | 0 | 0 | 0 |
ULT | 1 | n.d. | 2 | 1 | 2 |
VOZ | 1 | n.d. | 3 | 2 | 2 |
ZIM | 0 | 0 | 23 | 0 | 23 |